Id Trinity | TRINITY_DN45635_c0_g1_i2 |
---|---|
Name Transcript | Ll_transcript_413755 |
Sequence | TGGCCTTCCCTTTAGGGGCATCGATGCCTTTTCTACGAGAAGAGAGAAGAAGCTGCGCTGTCCATTTCGCCTTCATTTAATTTTCTATAATCTCTTCTTC CAACACCGTGTTAGATACGTTTATTTTGATGAGTAGTTTCTTCTGGTAAAGGAGTTATGGCGTCGAAAGGTCCTAGGTATAAGATTGATCATGATACAAA AGCGAAACGGCAAAAGGCCCTTGAAGCTCCAAGGGAGCCTAAGCGACCCAAAACTCATTGGGACCATGTCTTAGAAGAGATGGCGTGGTTATCAAAGGAC TTTGAGTCAGAGAGGAAATGGAAATTAGCACAGGCGAAGAAAGTTGCTTTAAGAGCTAGCAAAGGCATGTTAGATCAGGCTACAAGAGGTGAAAAGAAGA TGAAGGAAGAAGAGCAGCGGGTAAGAAAAGTCGCACTGAGTATATCCAAAGATGTTAAGAAATTTTGGACGAAAATCGAAAAGCTGGTTCTTTACAAGCA CCAAATGGAGCTTGATGAGAAGAAGAAAAAAGCACTTGACAAACAGCTTGAGTTTCTCTTGGGGCAAACTGAGAGGTACTCCACAATGTTGGCCGAAAAT CTTGTGGATGCTTATAAACCACAAAAGCAGAATTCTCCGGAGCTTCAAATGCGTACAGAATACAAGCATGTAGACGGAGACATTACTAATGAAGCTAAGG AAGTTAATGTTGAAGAGTATCCATCAGATGCACCTGACAATGATGAAGAATATGATGTACAATCTGATGATGAATCGGTGGATGATGAGCAAACCCTTGA GGAAGATGAGGCTCTTATAACTGAAGAAGAAAGGAAAGAGGAATTGGCAGCTTTGCGTGATGAAATTGATCTTCCAATTGAGGAGTTACTAAAACGTTAT GCTGGAGAGAAAGGTGAGATTTTTCTCTCTGAGGGAGTGAATGGAGAGAAAGGAGAACCAGAAAGGCAAGAAAGTAGTCCAGAGCATAGTAAAGATGCTG TGCAAATAATTAGAGCTGATGATGGTGATGAAAATGATGATATTTTATCTGTCAGCAAAGTTGTCTCTAGCAACTCCAGCATGTCCCCTGGTCGACGTTG TGACGAAAGTAATGGTGATAAAGCTACACAAGCAAGCAATCTATCTCAATATGAGGACCATCCACCTGAAAATCCTAGTGAGGTTCCCAGTGAGATGGCC AATGAAAGTATTGCATATGACTTTAATGATGAAGAGGAAGATGCTGACTTCTTGCTTGGAACAGAAGATAAGGATGACGAAACAACCTTATCCGAGGAGG AGAAACTGGAAAGGGTTGACGCAATTGATCCAAGGGATGAGATTGCATTATTGCACAAGGAGAGTGACATGTCTGTTGAGGAACTCCTTGCAAGGTATAA AAAGGATCTGGGTGATAATGAAAAATGGGAAGATGATTCTGATGCTTCTTCTTTATCAGAGGATCATCGGGATCCTCCAGTTCATGAGGAAGCTGGAGCT GCTGTTTCTGTGAATGAAAATATCAAGTCTGGTGAGCACCTGGCTATTGTACAGTCCCAGGCAGAAGAACCTTGGGAAGCGCCTCCCGAGAATTCAGAAA AAACAGAAAGTGAGTATATCATTGCTGACGCAGCTGCTGCTGCAAGATCAGCACAGCCAACGGGAAACACCTTCTCCACAACTAAAGTACGTACGAAGTT CCCATTTCTACTCAAGTACTCTCTTCGTGAGTATCAACACATTGGATTGGATTGGCTTGTCACAATGTATGAAAAAAGATTGAATGGAATTTTAGCAGAT GAAATGGGGCTTGGAAAAACAATCATGACTATAGCTTTGCTTGCACATCTGGCTTGTGAAAAGGGGATTTGGGGCCCACATCTAATTGTGGTACCAACAA GTGTAATGCTTAACTGGGAGACTGAGTTTTTGAAATGGTGTCCTGCTTTTAAAATTCTGACTTATTTTGGAAGCGCAAAGGAGAGAAAACATAAAAGACA AGGATGGCTGAAACAAAACTCATTTCATGTATGCATAACAACTTATAGACTAGTTATTCAAGATTCAAAAGTTTTTAAGCGCAAAAAGTGGAAATACTTG ATCTTAGATGAAGCTCATCTCATTAAAAACTGGAAGTCACAGAGGTGGCAGACGCTCCTGAATTTTAATTCAAAACGACGTATTCTCTTGACTGGTACAC CACTGCAGAATGATCTCATGGAACTGTGGTCTCTCATGCATTTCTTGATGCCTCATGTTTTCCAGTCTCATCAAGAGTTTAAGGATTGGTTTTGTAATCC TATATCAGGGATGGTAGAGGGAGAGGAAAAGGTTAATAAGGAGGTTGTTGATCGCCTGCATAATGTCCTTCGTCCATTCTTGCTCCGTCGATTAAAGCGA GATGTGGAGAAGCAACTTCCAATGAAACATGAGCATGTCATAAACTGTAGATTGTCAAAGAGGCAGCGGAATTTGTATGAAGACTTCATTGCTAGTTCAG AGACCCAAGCCACTCTTGCAAGTGCCAATTTTTTTGGGATGATTAGTATTATCATGCAACTTCGTAAGGTTTGCAATCATCCTGACTTATTTGAGGGTCG TCCTATTGTCAGCTCTTTTGATATGTTGGGTATTGATATTCAGTTAAGCTCTTCTGTTTGCTCCATCCTTTTGCCCAGTACCTTTTCTACAGTAGACCTA AGAGGTTTAGGTCTTTTATTTACTCATCTTGACTATAACATGACTTCTTGGGAAAGTGATGAAATCCAAGCTATTGAGACCCCTACAAGTTTAATCATGG AACGTACTAATGTGGGTGACCTGGAAGTTATTAAGCCTGGACTGAAATCTCAAAAAAAGCTGCAAGGAACAAACATTTTTGAAGAGATCCAAAGGGCAAT TTGGGAAGAAAGGTTAAGACAGGCGAAGGAACGTGCAGCAGCTATTGCGTGGTGGAACTCCTTGAGATGTAAAAAAAGACCCATCTACTCAACCTCCCTA AGGGATCTTGTTAGCATAAAACATCCTGTATATGATATTCATCAGGTGAAGGCAAACCCTGTTTCATACTTGTACTCAACAAAGCTGGCTGACATTGTCC TATCCCCAGTTGAACGATTTCAAAAGATGACTGACGTAGTTGAAAGTTTCATGTTTTCAATCCCAGCTGCACGAGTGCCTTCCCCTGTGTGCTGGTGTAG TAGAATTGAGACACCTGTGTTTCTGGATTCATCTTACAAGCAAAAATGTTCTGAAGTTCTGTCACCATTACTGTCACCTATCAGGCCAGCAATTGTTCGC CGGCAAGTGTATTTCCCAGACAGGCGTCTAATACAATTTGACTGTGGGAAACTGCAGGAATTAGCAATTTTGTTAAGGAAATTAAAATCAGAAGGTCATC GAGCTCTGATATTTACCCAGATGACAAAGATGCTTGATATATTAGAGGCATTCATTAATTTGTATGGTTACACTTACATGCGATTAGATGGATCAACTCA ACCAGAGGAAAGGCAGACCTTAATGCAGCGTTTTAACACAAATCCCAAATATTTTCTTTTCATATTGTCTACCCGTAGTGGGGGTGTTGGTATCAACCTA GTTGGAGCTGACACAGTGATATTTTATGATAGCGACTGGAATCCTGCTATGGATCAACAGGCTCAAGATCGGTGCCACAGAATTGGTCAGACACGTGAAG TTCATATCTATAGATTGATTAGTGAAAGCACCATTGAGGAGAATATTTTGAAGAAAGCAAATCAGAAGCGTGCACTTGATGATCTTGTTATACAAAGTGG GGGTTATAATACTGAGTTCTTTAAGAAGCTTGACCCTATTGAACTGTTTTCAGGTCATAGAACACTTTCTGTAAAAAATATCCAGAAGGAGAAAAACCAG AACAATGGAGAAGCTTCTGTAACCAATGCAGAGGTAGAGGCTGCATTAAAAGATGTAGAAGATGAAGCAGATTATATGGCATATAAGAGAGTTGAGCAGG AAGAAGCTGTGGACAACCAGGAGTTTACAGAAGAAGCCATTGGGAGACTTGAAGATGATGAGTATGTTAATGAGGATGACATGAAGGATGATGAGCCTGT CGAATTCGGTGAATCTGTTCCCAGTTTAAGTAAAGAGAACTTGTCAATGTTAAATGGTAATGATCCTACGGAAGATAGACCACCCTCTGTTCCTAACAAA GAAGACGATGTTGACATGATTGCTGATGTCAAGCAGATGGCTGCTGCTGCAGCTGCAGCTGGACAAGCAATCACAGTGTTTGAGAGTGAGCTACGTCCTA TTGATCGATATGCCATTCGTTTTCTGGAGCTGTGGGATCCAATTATAGATAAAACTACATTGGAATCTGAAGTCAGGATTGAGGACACAGAATGGGAGTT GGATCGCCTTGAAAAGTTTAAGGAGGAGATGGAGGCTGAAATTGATGAAGATGAGGAACCTCTTGTGTATGAAAGTTGGGATGCTGATTTTGCAACTGAG GCATATCGGCAGCAAGTGGAGGCCTTAGCTCAACATCAGTTAATGGAGGAACTCGAATATGAAGCTAAACAGAAAGAGAAAGCTGAGGAAGAAAATTGTG ATTCTAAAATGACTCAAACACCAAGTGATTCAAAGCCCAAATCTAAAAAGAAACCCAAGAAAGCAAAGTTCAAATCTCTGAAGAAAGGATCGTTAACATC TGGCTTGAGATCTGCAAAACAAGAGCCACAAGCGGATACAATGACTATAGATGATGAGGATGTCAACAGCTTGGCTTTTGGTACTCCAGAGTCAACTTCG CAGAAAAAACGTAAGATATTGAAGCCAACAACTGATGGTGAAGAAAAAAGACTGAAGAAGTCCAAAAAGATGAAGAGAAAATCTCCTGACATTTGTGCTT CAGATTTAGATTCCAACTCATTAATTGTGCTGGATGAACACACAGAGTCAAAGCTGGGTGAAAGTCTGGTTGATTTTGAACAGAGAATGGCAGGCAGGAG TAAGATGGGAGGAAAAATATCCATTACTCCAATGCCAGTAAAACGGATATTGGTGATAAAACCGGAAAAACTGAAGAAGGGAAATCTTTGGTCCAAAGAT TGTATTCCATCAGCTGATTTTTGGTTGCCTCAGGAAGATGCAATATTATGTGCCATAGTTCATGAATATGGTTCTAACTGGAATTTGGTTAGTGAAACAC TTCATGGCATGACTGCAGGGGGGACATTCAGGGGGAGATATCGCCATCCTGTCCATTGCTGTGAGAGGTTCAGAGAGCTATTCCAAAAATATGTCTTGCA CTCGACGGACAATGCAAATCATGAGAAGATCAGCAACACTGGCTCAGGAAAGGCTCTTCTTAAAGTTACAGAGGATAACATTCGGATGTTGTTAGATGTT GCTTCTGAGCAGCCAAACAGAGAGTTACTACTGCAGAAACATTTTTTTGCATTGCTGTCGTCTATCTGGAAGGTGTCAGCACATGTTGACCGCAGGCAGA ATCCATCACCTACTTGTAATGGTCTCTATTTTGATCAGAGTTTCTTTACTTCCAAATGCCAACAATCACAGAATTCCTTGAAGAAACCCTCTGAAAGGAT TATGTTTACTAATTTGGCCCAGAGCAAGAAATTAATAGCTGCTGCTCTGGATGACACAATAAGTAGGTCAGAGAGTGACAAAATCCTCCCAGCTAATCAG GGTAAAGAAATGCCATTGAGTGCAGATAAGCTGGATATAACATTGGAGTTCCAGAAAGAGGAGAGTGATGTCTTATCTTCATTTCCATCTGTTATAAATT TATCAATTGATGGGATTGGAGCTTCACCATCTTTAAATAAGCAAACAGGAGAATGTGACCATCTCAGAGGTTGTCTGTCTGCTGCTGAGAATCGTTTCAG GGAGGTATCAAAAACTTGTGAGGAAGACAGTCCTGGATGGGCTTCATCAGCATTCTCGACAAACGATTCAAGGTCTCAACCTGGATCCAGGATACAATCC TTGGGAAAGCAAAAAACTTCAATCTCTGAAACTTCTAAGCATTCCAAGTCGAAGTCGAAAAGAGTTTCAATGGATCCCAGTGACATGCAACAGGCTGAGC CATCACTCCAGTCAATGCCACCACATAAGGAACTGAAGTTTGATCTTACTACATCCACTATGGATATAGTTGGAATTGATGATATGGATACCAATCCCCC CTTTGGTTTGCATTTGGAAAATTCATTTGAAAGGGAGAGTTCTGAAGCTGTCCCACATGATTATCTAGATGGTTTAATCTTTGGCCTTGATGATTTAATT GAATTCCCTGAATACACTGACATTAGATAGGGTCCAATGATAGCTTGAAATGCAGTTTTGAACTATTCCTCTTTGCCATTTGAGTACAGTCTTGGCAAGC TTTCTTGTCAATTCATGAACAACCGTTTCTCCTCTTGATCTAAATTTTATTGTTGTTGGTATTTACATTTACATGTTGGTATTTACATTTACATGTTGGT ATTTACATTGTTGTTGGTATTAACGTGTTTGTGTCGAGATTGATTTAAATAAAGCAGTGATGGGGAAGGTGTGTTGAAGGCCACTAGCATAAGGTGCATC TGTAAGAGGTGTGGTTGTTATGGTCATCTAACGTGTAATTTCTCATCCCCAAACCCTATTCACACTCATCGACGAAATGAACCAAACATCCGTTTCTTCT AAGGACTATGCGCAAACATTTATTATGTTGATACCACTCCTTCGTGGTAGAGTAAAAAAAAGAGCTTTTGATCCCATACTCGACAACATTCAA BLAST |
Tissue | pods |
Gene name | LI_gene_140163; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_413755
Blastp | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 62.38% of identity |
---|---|
Blastx | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 from Arabidopsis with 68.86% of identity |
Eggnog | chromatin modification(ENOG410XP0A) |
Kegg | Link to kegg annotations (AT3G12810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414895.1) |
Pfam | HSA (PF07529.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |