Ll_transcript_277311

• Id Trinity: TRINITY_DN45735_c0_g3_i3
• Name Transcript: Ll_transcript_277311
• Sequence: AACATTGTTATCAAGAAAGGTGCCTTTATGTTTACCATGTTCCACTTGCAACACAATAAACCACATGAGTAGAAGGAATAGAGAACCCATAACATATTTC TGAAGCCACTCACAAAATCAATCCATTTCTTCATTTTTCTTTCTAACTTTCTTCAATCAAATTCTGTCACTAGCCTCGCCGTCACGGCCAACGTGTCCGC CGACGATTCCAACAACGAAGTTAGCCCTTCTGTTCTTCTCTCTCGGAATTTGATGTGATTAGCAGAACATTCTTTTTCATCGAGTTTTGAGTTCTTGTGC TTTGGGGTTCATTGCCATGAGTGAATTGCTTGCCAAAGCGAATGAGTACTCGAACTGTGTAGAACAAAATGTTTTGATAGAGAAATGTTGATGTTGTGTT GCAACGAAGTACCGAGAAAGTAGGAAAGTGCGCTGAGAAGACAGACCAGAGAAATGGAATGCAATAAGGATGAGGCCGTCAGAGCTAAAGAAATTGCTGA GAGGAAGTTTATTGCGAAAGATACTTTGGGTGCAAAGAAGTTTGCATTGAAGGCCCAAAATTTATTTCCTGCTCTTGAGGGTATTCCTCAAATGTTAGCA ACACTTGATGTGCATATTTCTGCTGAGAATAAAATAAATGGAGAAGTAGATCGGTATAGTATCCTTGGTGTAGACCCCCTTGCTGATGAGGATACAGTCA GAAAACATTACAGGAAGCTAGCTCTCACGCTTCACCCCGATAAGAACAAGTCCGTTGGAGCTGACGGGGCTTTTAAACTTATTTCAGAGGCATGGAGTTT ACTATCAGATAAAGCTAAAAGGGCAGCATATGATGAGAAGAGAAATGCAAAAGCTAGGAAAGTTTCAACTAAGTTTGCAGGTTCATCAGCCCAAACAGGT GTTAATGGAAGTTACAATTTTACTAAGACTGCCTCTTCAAGTGCAAAGACTCAGATGAGTAATGCTAAAGATGCTCAGAAGAGTGCTGCTAAAGAATCTC AGAAGAATAACGCTAAAGAATCTCAGAAGAATAATGCTAAAGAACACACTTCATCTTCTACCAATAAATCTAAATCAAATACATTCTGGACTGTTTGCCA TCGCTGCAAAATGCAGTATGAGTATCTTAGAATCTATCTTAATCTTAAACTCTTGTGTCCCAATTGCCATGAACCATTTTATGCTGTAGAAACTGCTCCC CCACCTTCAAGTTTTATTCGACCGCCTTCAACTTCGTGGACCTTTTCACAGCATCAGGAAAATTCTAGTCGCCAAGTGCCTAACAAGATGAAGTCTAATG CCGGAAAGAAGGCAGCTTCAAATGTTGGAGCTGGGGGTTACTGTAAAACTGACTCTAATAACCCTACCAATTTCCAGTGGACTCCATTTTCAAAAACTTC TGGTGTCTCTAATGTTGCTCGAGCTGCTACAGTTGTTCAGCAGGCCTATAATAAAGTGAAGCGAGAACGTGTGGAAGCACAGGCAGCTATGAAAGGGGAA GATGCCTTGAGAAGAAAGCAGCATGTTCCGAAAAAAAGTTACTTCAATCCTGCTAAGAGAAGAAAGGGGTGCACGGATGATGCTACTGTGAGTAACAATG CTACGGAACATGTAAATAGTGTGGGATTTCCTTGGGATCTTCTAATGATGAAAGCTAGGAAAGAAATCATGAAGAAACTTAGCGACGTCCAGTCAAATAC TGTTGATAAAGCTGCCATGAAAGAGAATGGAGATAACTTGCAGAAAACAAATGAGGAAGGAGAGAAGTCTGTAAGAAATTCTGAAACATGTGCTCAAAAT AACACTGGGAAGGCAGAGGATAGAAAGAGTGGATGTGAAGGCATCGAGACGATTGGAGTTACTACTATCGCCAAAATTGGCACAAAAGTTTTGGAGACAA TACCGATTGATGTCCCTGATTCTGAGTTCCATGATTTTAACAAGGTTCGAACTGAAAAATCTTTTGAAGAAAATCAAGTATGGGCTGCATATGATGACAA TGATGGGATGCCTCGAAATTATGCATTGATCCACAATGTGATCTCTCTGGATCCATTCAAGGTGCGTATCAGGTGGCTCAGCTCAAAGACCAACGGTGAA CTGGGCCCCATAAATTGGGTTGTTTCAGGCTTTTTAAAAACATGTGGGGATTTCAGAATTGGTAAACTTGAAATCTGTGACTCCATCAATTGTTTTTCTC ACAAGGTTAGGTGGGGAAAAGGCAACGATGGAGCCATTTGTATATATCCCAGGAAAGGGGATGTTTGGGCCCTCTATAGGAATTGGTCACTTTTTTGGAA TGAGCTAACAGCAGATGAGGATATACACAAGTTTGATATGGTTGAAGTACTTGAGGGTTTTACTGAAGAGCAGGGTGTAATTGTTATTCCTATGATCAAA GTGGCAGGGTTCAGGACAGTATTTCGTCACCACTTAGATCCGAGTGAAATCAGGATCATTCCAAGGGAAGAGATGTTTCGGTTCTCTCACCGGGTTCCCT CACACTCACTTACTGGTCAAGATGCTCCAAATGCTCTAAAGGGCTGCATGGTGCTGGACCCAGCTGCTACTCCATCTGAACTTCTTCAGTTGATACAAAC TGTAAAAGGGGAAGACATGATGGACATCGAGGACACTGTTATAAAAGAAACAAGTGATGACATGAAAGAATCCGGTGACATGGATAAGGAAGGGGAAGAA AAGGAGGGCAATAATAAAGATATCCAAGAAATAGAAACTTTGTAAGAGAAGAAGATTTGTGAAAACTTGTAGTATTGACCATGTGCAGCACTCTTAATGA AATCAACTTGAGGACTTTTTGGCTCGTTTAAGAAATGGAAAATGCAGTAACACTCTTAAGCATACTGCAGAAAGATTTCATTTCTGTTCTGACATTGCAG TTAATTACTTCTCCAATGGTTGAAGTTAAATGGTTCAGCTCCAGATCATACCAAACAAAGCTAAGTATGGAATGATGAAGTTGTGCCATCTGCAGATTGT TCTTCTCGGTTAAAATGAGAACTTGTCTGAGATAGACCTTTTTAGGTTCTTACTCAATTTTGTTCTGTAAATCGGATTTAGTGTCATGTTCATATATTTG TAAGATTTTTAGCTACCATTAGTGATTAATAACATTGCTTTACAAATTGATTCCAGTTTCTTAAATGGTGTTTGTTTGAGTCATCTTTATATGATCAGTA GATTAGATCATTCTGAATGAACAGAGAGATTCCTCACTTCTTCA
• Tissue: pods
• Gene name: LI_gene_140522;
• Additional information: details;

Expression of Ll_transcript_277311

FPKM

• PAB: 0.1
• PNAB: 3.3
• PS1: 3.9
• PS2: 3.7
• PS3: 4.2
• PW1: 3.5
• PW2: 2.5
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277311

• Blastp: Chaperone protein DnaJ from Staphylococcus with 53.97% of identity
• Blastx: Chaperone protein DnaJ from Staphylococcus with 53.97% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (SE1266)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413745.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;