Ll_transcript_276890

Id TrinityTRINITY_DN45763_c2_g2_i1
Name TranscriptLl_transcript_276890
SequenceTTATGATAATTATTTGTTTTTGAAATTGTGGTTTAGTATAAATGTGTATTTTGAAAGAAAAACGGGCCAGCATCTGCCAAATATAGGACGAACTGACATT TTGGGCTCTTTTAGTATAAGGGCCGGGTCAGACCAAACCATATTCTTTGACGGGACAAAGACGGGTCGGGCCGGCCCATATTGCCACCCGTAGTATTTAT ACAGCATAGATGAATAAAATGTTGGTTTGATTTGACATAACTATATAAGGCATGGGGTAGAATTTGTGAAAGAAAATACACAAATATGTTTTGTGATTGG ACGGAAAGAAGCAGCAGAAAAATTGGGATTAGGGAAACAGAAATCAAACAATAATCGCGTCACCATGTCGGAAGCATCCGAAACGTCGTCGTATTGGTGC TACCACTGCGAGAAACGCGTCTCCACCGAAACCCTCCCCAACCTCTCCGATCTCATTTGCGCCGACTGCAAAAACGGCTTCGTTGAACAAATTCCTCTCC TTACTCCTTCTCCATCCCCTCCTTCTTCCGATTCAGATCATTCTCACTTTGCTTCCAATTTTCTCCACGTTCTTCGCCTCATTGCTCAATCCGCGCGTGA TCACGACGCTCCCCCTCCTCCTCCTCCTCCTCCTTCTCGCTCTCCTGGCAGCGATTTCCTCAGGATCGAGCTAGGTGGCTGGAACGATGATGAAGAAGGC GATGATGATAACGATGATGGAGAAGAAGAAGAAGAACAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAGCTGGATCGAAACAGCAATATGGATCTTCCTG GAGATGATGAAGATCTGAGGAGGAGTAGGAGGAGGCGAGAGGTTCTTCGTCTTCGAATTAGGGATTTGGCGATGCGAACAAGGAGCATGAGGAATCGGAT ATTGGATTGGTCTGATATTCTGTCTGGTCTGGATGATAATTCGATTCAGTTTCGTCTTCAGGTACCGGAGTCTGATCGATACGTCGGGAATCCGGAGGAT TACGTCGACGCGGCTGAGTACGAGGCGTTGCTGCAGACACTGGCGGAGACAGATGGTGGTGGGAAGAAGGGAGCACCTCCGGCTGCGAAGTCCGCGGTGG AGGCGTTGCCGACGGTGGAGATCGTGTCGGAGAAGGAGGTTGTGGCGTGTGCTATCTGTAAGGATATGGTTGGTGTTGGTGATGTGGCGAAGAGATTGCC GTGTGGGCATCAATACCATGGAGATTGCATTGTTCCTTGGTTGGGTTCAAGAAATTCATGCCCTATTTGTAGGTTTGAGCTTCCAACTGATGATAAGGAA TATGAACAACAGAGGAAGAATAAGAAGGTGATGAATAGTTCTTCAAATGGAGCTTCCGGTTCGGGTGGTGGATCGGGTTGATTTCGTTCAATCTGGTATG TTATGTTCAGTTCTGCTGTGCCATTTGTGTAATATAATTTGGTGCTTTTTATCTTCTGTCAACTTTTTTTATTCCCCTTTTTGTAACAAAGGTTGCATAA TGTTATTTATATGAAGCTTCATGGAGTTGAATTCTTAGCTGATGCTCTCAGATCAATGTATATAGTCTCTTGTATAACACTACTTCAACAGAATTTGCAT TTTTTTGAATAATTTTATGCCTGTCCTTTTGTTGTGGTCATTTTTTGTTGCTGGATTTGTGGTATAATCCCATGGATTAAACACTGGTTTAGTGAAATTG ATCTTGGTCGATTTTGTCTCTCTTCGGATTAGTTATCGTTGGACTTGTGGCAAGTAGCCTCGGAAAGTTATCTGTAGTAACAAGCTCTATATACTTGTGT GAAATGACAAATAGTTTTGAAGTTACTAGTTAGCAAAATCTGAAGAAAGATCAAGTATTAGAGAGAGTGCATTTACATAGATATCTTGATGGATCTCTCA CTACAGAAAGCAACTTTATCGGTAGATATGAACCGGATGTGGTTGATAAGTAGCACTGCAATGCTTTCAGCAGCTTCTTTTCATGATTAACACTAAACAG TTGCACAAAAACTTTCCTTACTCCACCAACTTGAAGAATTCTGGCTCCCAAGCGGAATTTCCCTTTCACTTATCTGTTATCTTTGTCCCCAATCTCACTG CATATCACAGTAGCAGTTTCAAGCCATCAGGACAAAACATGATTCTATTTTCAAATCATGACAAACTAGGCATCATACATAGTCATACAGAGCATACTCT GCATCTTGCAACTAAGCAAATGAAATATCAGCCTCTCAAGATTAAGTACCCCGTTCTCGGAATCCATGTGCAACATTGTCAGCTTTTCTCCCAAACTTAG TCATTCTAGTCTGAACTGATTGATGATTTTGAGAAGTATCAGGTACCATGGATGTGGAGGAACTTCTTGTATACCAACTAGCTTATGAGAAGTATTCAAG ATATCTTCTCACTTTGGTTGATGAGCCCTTATAAACCACAGGTATATATATGGTTAAAAGGGAACATGGTGATTATTTAATCTTTGTAGGATGAGTAAGC TATGGATCATCATGACCAAAGGAAACATATAAGCAACCATTTAATGTTTTATGGAAAAGGATCATAATTCATAACAGATGTTCCTTTTGCATCTCTTCTG TTTTGTGCCTTGAAAGGGAAAACAAATTTGAAGGGGAAATGATATAATACTTTATAGTATATAGTAGTGATTTCCATTCCTTTGGACAGCTACAGAAATT TTCAAGATTGATCATTTCAGAAAAAATAGTGATGATACATGTATATTGTGACCCAAAACTATTTAGTGAGGGTTGAACACAAACTTTCAGAAAAATATTT GTTAAGGACCCTATAACTATAAAGACTTTGCTGGGTACAGGATTTAACTTCCATGGTTACGAATATGATAAGGGTCTAAGGGTGTTAGGGTATCATAATT CTTCATCCCACTGTTTCACCAGTTATTTTACATGATT BLAST
Tissuepods
Gene nameLI_gene_140644; 
Additional informationdetails; 

Expression of Ll_transcript_276890

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_276890

BlastpE3 ubiquitin-protein ligase CIP8 from Arabidopsis with 46.95% of identity
BlastxE3 ubiquitin-protein ligase CIP8 from Arabidopsis with 63.46% of identity
Eggnogzinc ion binding(ENOG41121N2)
KeggLink to kegg annotations (AT5G64920)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019452604.1)
Pfamzinc-ribbon (PF14369.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;