Id Trinity | TRINITY_DN45801_c2_g2_i7 |
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Name Transcript | Ll_transcript_356341 |
Sequence | GATTTTTCCAATATAAAAGACTTTTAGTCCTTAGTTGTATATCAACCACTCAACTACCTAAACCCACCAACTCTACAATAAATAACCCCTTTCCCTTCTC TTCCTTTGAACCAAACCTGCTCCACAGAAACAACACCATCTCAAAAACTCGATCTCCTTAAAAAAAAATTCAATTTTCCAAGAACCCTTTTTTGGATCAA AGTTAAGGACTTAAATGATGGTGATTCTAAGGCTTATTCTGACACTTTCTTTATTGAGTTCTCTACTTGTGATAACCTCAGCCCAGACATGCCTACAACA AAATTTAACTTCAAACAATGTTTTCACAACATGCCGTGATCTTCCACACTTGACATCTTATCTTCACTGGTCCTATGATCAAGCCACAGGGAAACTTGAC ATAGCATTCAGACACACAGGAATTACCTCAACAGATAAATGGGTTTCATGGGCCATAAATCCCAACAATGATCTTAGTTCAGCTATGCCTGGAGCACAAG CACTTGTGGCTATTCCACAAGCTAGTGGTGCACCGAGAGTGTATACTTCATCCATAGCTAACTATGGAACCTCTTTGGCTGAGGGAAATATCAGTTATCC TAACACTGGCTTAACTGCTACATATCAGAATAGTGAATTGACCATTTATGCTACTCTTACTCTTCCTAGTGGAACCACTTCATTGGTGCACCTTTGGCAA GATGGTCCTGTATCTGGTTCTACCCCTCAGTCACATGCAATGGATAATTCTAATACTCAAGCTAAGGAGACTTTGGATCTTGTTTCTGGTGCTAGTCAGG GAGGAGGATCAACTGGTAATTCACTTAGAAGAAGAAGAAATACCCATGGAGTGCTAAATGCAGTGAGTTGGGGGGTATTGATGCCTTTGGGTGCCATAAT AGCAAGGTACATGAAGGTGTTCCAATTTGCAGACCCTGCTTGGTTTTACCTTCATGTCACTTGCCAAACCTCTGCTTACATAGTTGGTGTGGCTGGATGG GGAACTGGTCTCAAACTCGGCAGCGACTCGGTCGGTGTTACATATGACACCCATAGAACACTTGGGATCATCATCTTCTGCCTTGGAACCCTTCAGGTTT TTGCTCTGCTATTGAGGCCTAACAAAGATCACAAAATCAGAATCTACTGGAACATTTACCACTACTTGATCGGATACTCGACCATAATCATCAGCATCGT CAACATTTTTAAAGGGTTCGAGGCATTGGAGGTTTCCGTCCAGGACCGCTACAACAGCTGGAAGCATGCATACATTGGTATTATTGCAGCTTTGGGTGGC ATTGCTCTCATTTTAGAAGCTTACACATGGATCATTGTGATCAGAAGAAGGAAATCGGAGAGTAAGACAGCACACGGCGTTAACGGAACAAATGGTGTTA ATGGATATGGTTCTAGGCCTCAGCAGGTGTAGGGTTAGTGCACCAGATATAGTAGATTTTTGGCTTCTGAATCCTATCTATATGAGTCTTGTTGTTGGAC CCTTTCTGTATATTTTTGGTCACATATATTGAGTATTTAGAATGCTCTCAGCTTCTTAGAGATTGGTTTTGAGATTATTCTTTCATAGGATAGTGAATTC CTGGGGTTTGGTTTTCTCCATTCTATTCCAGATGATACTTTGTATCGTTTTCTTTATATATTGTATTTATTTGTTTCCTTATATCTTCACTTTCTCAACA CCTTAGAGTTTCAAATACTTTTTATTATGTTATCTCTTGGGGCAAGATGAAGGCATTTAAAATTTCTTAATTTGACTGTTAGGGAAGGACCTGAAGTTTT ACCATAAATTCTTTAAAGAAATTATCCATCTCACGGAGTTTTAAGTTTGTTTAACACAATCTTCCCTGTCTATGTTTAATTGATTCACA BLAST |
Tissue | pods |
Gene name | LI_gene_140784; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356341
Blastp | Cytochrome b561 and DOMON domain-containing protein At4g17280 from Arabidopsis with 53.73% of identity |
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Blastx | Cytochrome b561 and DOMON domain-containing protein At5g47530 from Arabidopsis with 51.92% of identity |
Eggnog | Eukaryotic cytochrome b561(ENOG410ZKV6) |
Kegg | Link to kegg annotations (AT4G17280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419294.1) |
Pfam | Protein of unknown function (DUF568) (PF04526.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |