| Id Trinity | TRINITY_DN45823_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_356856 |
| Sequence | AGGAATAATAGTAAGAGCAGCTTCAAGAAACTCAATAGCGCGTCCATAACTCCCTTTTCCATAAGCTCTCTGACCTAAATCAAACATCAATTCCGCCGTT TCTCTTCTCTCTGCTTGTTCCTTAGCAACTTTCTGAAGCTCTTTATTCACTCACTCACACACTATTTACAATGACTCTGTTTTCCCCTGTTTCACTATCT CCACTCAGCATGGCTCTCTTCTTTTTCTTCTTATTCAATTCCTTCTATGTCTCTTTCTCTGCTACACTCAACCATAACAACAACTCATTCTCACTCTCTT TCCCTCTCACCACTCATTCACTCTCCACAACAACGCTTTCAAATTCCAAAACCAACCCAAAACTCAAAACCCTTTTATCATCATTACCTTCTTATAACGT TAAATCCAGTTTCAAGTATTCAATGGCTCTGGTGGTTTCCCTTCCCATTGGGACTCCTCCACAAATTCAACAAATGGTTTTGGACACAGGAAGCCAACTC TCTTGGATTCAGTGTCACAACAAAGCTCTTAAAAAAACACCTCCTACGACGTCGTTCGACCCTTCTCTATCTTCCTCTTTCTCCATCATCCCATGCACTC ACCCACTCTGCAAACCCCGTGTTCCCGATTTTACCCTTCCCACCACCTGCGACCAGAACCGCCTCTGCCACTACTCTTACTTCTACGCGGACGGCACCTA CGCTGAGGGCAATCTCGTCAGAGAAAAACTAACCTTCTCCCCTTCCCAAACTACCCCTCCCCTCACCCTCGGTTGCGCCACAGAGTCCCGCGACTCCAGG GGCATTTTGGGAATGAACCTTGGTCGCTTGTCCTTCCCTTCCCAAGCTAAAATCACTAAATTCTCATACTGTGTCCCGGTTCGACAACCCCGACCCGCTT CCGCTTCCGGTTCGTTCTACCTTGGAAATAACCCGAATTCAAATCGGTTCCGTTATGTTAACATGTTGACCTTCACTCAAAGTCAACGCATGCCTAACCT AGACCCATTAGCGTACACTGTTCCATTGCAAGGTATAAGAATCGGTGGAAAGAAGCTGAACATCCCACCCTATGTTTTCAAACCCAACGCTGGTGGGTCG GGTCAAACCATGGTTGATTCCGGATCCGAATTCACTTTCTTAGTTGATGAGGCTTATGATAGAGTGCGGGAGGAGGTAGTAAGATTGGTGGGACCCAAAC TGAAGAAGGGTTATGTATACGGTGATGTTGCTGATATGTGTTTTGATGGTGATGTGATTCAAATCGGACGGTTGTTAGGGGACATGGTATTTGAATTCGA GAAAGGCGTGGAGATAGTGATTCCGAAGGAAAGGATGATTGCTGACGTGGAAGGTGGGGTCCACTGTTTGGGGATTGGGAGGTCTGAAAGATTGGGTGCG GCAGGTAACATTATTGGGAACTTCCACCAGCAGAATCTATGGGTGGAGTTTGATTTGGCCAATCGTAGAGTGGGTTTCGGTGAAGCTGATTGTAGCAGAT TAGGTTAATACTTAAAAGAGAGTGGGAGGAATGATTGTGTGGGTGTCTGGTGCATGTAACTATCATGCGTAGACATAAGCCGTTTATTTCTGGTTACTGT TACTGTACAAATGATGAAAATACATATGGAGATTAAAGGTGATGAAAATATGATCGGACGGTCCATGATTGATGAAGAATAGAGTAAATGTCAATCGTTT TGGACCGACGCTGATGTGGGGCTTCTAGCAAAAGACGATGGGTCAAAGCTCATAATTTAATTGTCTACGTTATTATAATACGAGTGAGATTGATGTACAT ATTATGATTAGGATTAGAGAAAATCAATCACCAATAATACAACAACAATAAAATATTAATATGTGAACTCTCTTTTTTCTTCTTTCTTCCAATGTCGTGA ACCACTGGCTTCTTTGAAAATTACATGTCAACCAATGTCCTATTTGTGCGATGTGTATAATCTGTGTAACAGTGGAAGTATATACTATTATTTTATGATG GCAATTGAGATAAGCTTGAAATGAAAGTGATATTGTGTTCTTTCTTTCATTCTGAAAAAATTCAATCATTCTTAATGGTGGGTGAACATTTCTATCAATC GTGTCATTCGGGTAAACATATACTCATCGGTGCTAGTTATTTTGGAAGTCTTGGTTCTGAACAATTTGAAGTATCTGGGAACTAAAATATGCCGTGAACC ACTTGATTGTTTATTGTTTAGGTTACAATTCTCACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_140875; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_356856
| Blastp | Aspartic proteinase PCS1 from Arabidopsis with 36.65% of identity |
|---|---|
| Blastx | Aspartic proteinase PCS1 from Arabidopsis with 36.51% of identity |
| Eggnog | aspartic(ENOG410XNV7) |
| Kegg | Link to kegg annotations (AT5G02190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461969.1) |
| Pfam | Xylanase inhibitor N-terminal (PF14543.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |