Ll_transcript_356424

• Id Trinity: TRINITY_DN45875_c0_g1_i5
• Name Transcript: Ll_transcript_356424
• Sequence: GCAGAAAGGGGATAGTGAGAGAAGAGCGAGTGAGCGAAGCGAGTGGACCTTCCGAGTTTGTCTCCGATCCCATCCCAAACATAATTTGTTTCCCCCACTC GCCATACAACAACTTTCAAATTCTAACTTCCGTCACCTATCCCCGCTTTTTCAGGTTTTCTCTCTCCCTCTTTCCTTATATTTTTTTTCTAGCAATAGTA AGGTTGTTTTTCTTGTGACCTTGTTATGCTTGCGAGGCTGCAAACATCTAATTCTCGGCCCGAGTCTCGTGCACTGGGCCGTCTTAGAAATTATTCTTTT GGAAGGGTTGTAAATGAAAGATGACAAACTCAACATAATTGTTAAAAGTCGATGTGGGTCTTGTGTAATTATATTAACTTGTGAGATTTGTGACGTAAAG GTTGTATATTTGCAGAAAATGGGAATAAAGTACTACTTGTAGTCTAAGAAAATGAGCCCCAAGTTTGAACCCAAAACACAATTTTAAGTGAATTCTGATA GAAAAGCTTCAATACATTTTCGTTGAATAATATGATTGTGTGGGGTGTTGTTCACACGGTTGAGAGATCATTTTTGTGCTGAGTGATTAACAAGTTTTAA TATTTTGCTTCAGCTGAAAGTCGGAAACTTTGATACTGTAGCGTCTTTTATAGTGACAGAATGTGGAAAAACTGAATGGAGGTTGTGTTATTTCACTTAT TTAGAATTTTGGATTTACTGCTACAGTGGTTGTTTTTTTAGTTTCTTGGTCAAGTGTGACTTTGTGCATAATTGACTTGTTTCAATACCCTGTTTCAATA CTTTGTGTAAATAGTATTTAAAGTCATTTTAAGGCTAACCAAATCATGTAATTAAGGTAATTATGATGTTTTGTGATCTTTGCATTTTTATTAAAATAAC TCAAGTTCAGCCTCTGTTGTGTAATTCTGGCACACAGATTTGATCACAAGTCTCTCTTTTCTCTTAATAGTATTTTGTATTTCTTAATTATTTGAAGCCA TTCATTATAAATAACATCAGACCTTGAATTTGGGGCAGGCTAACATTGTATAGCAGTTATGGCAAGGTACACAAGGGTTGTATGCTTCTGATTTTTAAAT TGCAAGATTTGCACTTATGAGAAACTTGAAGCCATTTGTCATGATTAACATCATAATATATTCAGAACAGAATGCATGATAGTGAAGTGAGTGAAATATG GTTGATGCATTAAATGAAGCGCAACGCCGGGGTAGTGCCCTAGCTATTTCTCCAAAGAGGGACAGTGCTATGTTTGAAGGGGACAGAGATTTTGAGCCGC ACAATGGAATTGAATTTGAATCTCATGAAGCAGCCTATTTATTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAATAGCAGACG CTCAAAGAAAACAAAGGAGTTTATTGATGCCAAATTTGCATGCTCCAGGTATGGAGTTACACCTGAGTCTGACAGTGGGAGCAGTCGAAGACCAACTGTA AAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGCCGGATGGAAATTGGATCATTCATGAATTTATAAAGGAACATAATCATGAACTTTTAC CAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAGAAGAATAACATTGACATTTTGCATGCTGTTAGTGAACGCACCAGAAAGAT GTATGTTGAAATGTCTAGGCAGTCAGGTGGCTCTCAACGCATTGGGTCTCTCTTGGATGACATAAACTATCAGTTCGATAGAGGCCAATATTTGGCTTTA GATGAGGGAGATGCCCAAGTTATGCTTGAATATTTCAAGCGAATTCAAAAGGATAATCCCAACTTCTTCTATGCTATAGATTTAAATGAAGAGCAACGGT TAAGAAATCTATTTTGGGTTGATGCAAAGAGTAGAAGCGACTATCTCAGCTTTAATGATGTAGTTTCATTTGATACCACTTACATAAAAAGCAATGATAA GTTGCCATTTGCTCCTTTTATTGGAGTGAACCATCACTCTCAACCTATATTGATTGGATGTGCATTGGTTGCGGATGAGACTAAATCGACATTTGTTTGG TTAATGAAGACATGGCTTAGAGCGATGGGTGGTCAAGCTCCCAAAATTGTAATCAGTGATCAGGACAATGCTTTGAAGACTGCAATTGAAGAAGTCTTCC CAAACGTCCGACATTGCTTTTCTCTTTGGCACGTGCTAGAAAAGATACCTGAAAATCTGTCTTTTGTGATCAAACAATATAAGAACTTCTTGCCAAAGTT TAACAAGTGCATTTTCAAGTCATGGACAGATGAACAATTCGACATGAGATGGTGGAAAATGGTCTCTAGATTTGAACTCCAATATGATGTGTGGTTTCAG TCATTGTATGAAGACCGGAAAAAGTGGGTGCCGACATATATGGGGGATGCATTTTTAGCTGGAATGTCTACACATCAACGCTCTGAAAGTATGAACTCTT TCTTTGACAAATATATTCATAAGAAAATCACCCTTAAAGAGTTTGTGAAACAATATGGGATAATTCTTCAGAATAGGTATGAAGAGGAAGCCATTGCAGA TTTTGATACTTTGCACAAACAACCAGCACTTAAATCTCCTTCACCTTGGGAGAAACAAATGTCAACAGTTTATACACATGCAATATTTAAGAAATTCCAA GTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGGATACAGGCTGGAGATGGAACTATCGCAAAATTTATAGTTCAAGATTATGAGAAGGATGAAGAGT TTTTGGTAACATGGAATGAGATGAGCTCAGAGGTCTCTTGCTTCTGTCGAATGTTTGAATATAAAGGCTTCCTTTGCAGGCATGCATTGAGTGTTCTCCA ACGTTGTGGCTGTTCAAGTGTTCCATCTCATTATATCATGAAGAGGTGGACCAAAGATGCTAAAAATAGCCAATCCTTGGCAGATAGGACTCGTAGGATT CAAACTCGGGTGCAACGTTATAATGACTTGTGTAAACAAGCTATTGATTTGAGTGAAGAAGGATCGTTATCTGAAGAGAGCTATAATGTTGTTTTTCGTG CACTTGTTGACGCCCTGAAGAACTGCGTACTTGTAAATAATTCTAATCACAATGGTGCAGAAACTAGCAACAATTCTTACAGCTTTCGTGAAACAGAAGA AAATCAGGGTATCCTTGCTTTAAAACCAAGTAAGAAGAAGGCCACAGCTAGGAAAAGAAAGGTGCAATTAGAGCAGGATGTTATACTTGATGCGCAAGAT AGCCTGCACCAAATGGATAACCTTAGCTCAGATGCAATAACTCTTAATGGATATTACGGTGCCCAGCAAAATGTGCAAGGACTGCAGGTACAGTTGAACT TAATGGAGCCACCTCATGATAGTTACTATGTTAATCAACAGAGCATGCAAGGCCTGGGTCCATTGAATTCTATGGCTCCAAGCCATGATAGTTTTTTTCG AACACAGCAAAACATTCATGGGCTGGGAGGGCAATTGGAATTTCGTCCAACAACTACTTTTGGATATAGCCTGCAGGATGAGCCAGAACCTCAGTTTCAT GGCAACAGTTCAAGAAATTAGAAGTTGTCCCTTCTCTAATATGATAGTTTCCTCAGATGCTGTCAAGATTCTATGTGGATATGGTGATGAAAAGATTTTG AACTTTTGAAGGAACTTGGACTGCTCCATTGTGTTAACAACAGTTCATATTTATACTTCAAAGTTTCTGCTACTATCTTTCCCATCAAAGTTTCTTCATA TCTGGACAAGAGTTCACCTTCATGTATTTTACATGGAAGTTGCCTCTTATTGGGCCCCTCAAAATGAATTTATATAGATGAGTACGTAGAGAATCATCTT GCAATTCTGCATGTCACATATTTCGGGTAGCAGAAATATTAGGAACCAAATCTTCTCAGGTATTGGAGTCTGTTGAGAAAGAAGATATCTGTTTCTCGCA ACTAAGATGCAGTTGGAAGAAATAAAAGCACAACTGATTTGTATGATTCTTCTCAACAAAATTCGTCTCGCAAATCGCAAATCGCAAATCGCAAAGTATG TTATTTGCTGCCAATTGGGTTAGGTAGTTGTAATACTTGGAATATTCAGAGTATATGTATAATAGATGCAACACAAGTTTTGGTATCCATATTTTTCTTT AAAAAATACAAATCTTTTCATATTCCATCTTATTTTCCAAATTCCATTGTAGTATATATTATATGTTCTTCCAAATTGTTGATGTGTATCATTAAATGAT TTGGTTTTCAAGCACTTCATCAATTGTAGCCCAAATGTTTTGCTAGAACTACC
• Tissue: pods
• Gene name: LI_gene_141116;
• Additional information: details;

Expression of Ll_transcript_356424

FPKM

• PAB: 1.5
• PNAB: 2.8
• PS1: 3.7
• PS2: 1.2
• PS3: 3.1
• PW1: 3.8
• PW2: 1.3
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_356424

• Blastp: Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 69.21% of identity
• Blastx: Protein FAR-RED IMPAIRED RESPONSE 1 from Arabidopsis with 69.08% of identity
• Eggnog: Protein FAR-RED IMPAIRED RESPONSE(ENOG410YB4A)
• Kegg: Link to kegg annotations (AT4G15090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441488.1)
• Pfam: FAR1 DNA-binding domain (PF03101.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;