| Id Trinity | TRINITY_DN45922_c2_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_392531 |
| Sequence | CGGAATCCACGGTAGAGAAAATATTAAAGATAGAAGGCACTCCAATTGCACCTTCATTTCCAAAGAAACACAACACCGCTACACGACGTCGTTTTCAATT TCCAGGTTCTCGATCAATATGAAGCCAGTTTGTCCTTTTGTCAAAGCTGCTCGCCCGGATGATAATACTTGTAAAAGATCCGGTGAAAACTCAGTTAAAC ATCAGGTAGAGCCTGAGAATAAGCTGAAGAAAGAGGTTAGCAACTCAGCTAGTACTTCGCCAAAGTGCCCTTTTGGATATGACTCTCAAACATTTAAGAT CGGTCCTCTTAGCTGTATGGTATGCCAGGCACTTCTATTTGAGAGTAGCAAATGTGTGCCATGTTCTCATGTTTTCTGCAAAGCATGTATATCACGCTTT AGCGACTGCCCATTATGTGGGGCGGATATTGTGAAGATCGAGCCTGATGCTGAGCTTCAGGGTGTAGTTGATCGCTTTATTGAAGGCCATGCTAGAATCA AAAGGTCTGCCAATTCCGGCAAACAAGAAGAAGAAACAGAAAGTAAACCAGTCATATATGAGGATGTGTCTCTGGAAAGAGGTTCTTTCTTGGTGCAACA GGCCATGAGAGCATTCCGTGCTCAGAATTTAGAAAGTGCCAAATCAAGACTCAGCATCTGTGCAGAAGACATTCGTGGTCAGTTAGGAAAAGTGGGTAAC ACTTCAGAGTTATGTTCACAGCTTGGAGCAGTTTTGGGCTTGCTTGGGGACTGCTGCCGAACAATGGGTGATGCTAGTTCTGCAGTTGCTTATTTTGAAG AAAGTGTTGAATTTCTATCGAAGTTGCCAAAAGATGATTTGGAGATTCAACACACACTATCTGTTTCACTTAATAAAATTGGAGATCTTAAATATTATGA TGGAAACCTTCAAGGTGCAAGATCTTACTATTTTCAATCTTTGAATGTTCGCCGTGATGTCATCAAGCATACTTCCAATGTTCCAGCTCAGGCCCTAGAT GTTGCTGTTTCTCTTGCAAAAGTTGCGGATGCAGACCGAAATCTCGGGGATGAAAAGTTGGCTACCGATGGATTTCAAGAAGCCATAGACTTGTTAGAGT CACTCGAGTTGAACTCAGAAGCCAGCCGCCTTGATCACCGGAGGCAATCAGTGATAGAGTTTCTTAGAGGACAACTTTCAAATAAACAAGAACATGTTGA GCCAACAATCTGATATAAGCACTCTCCAAGGTTATGAAGAAAACATCAATTACAATGCAATAAATGTTTTTCTATGGGACATGCCAAGTTTGTCAAATAA GCTCAAGTTAATTAATGGAAGCACCTCTGATAGAGGAAGAAGAGATTTCAATGTTAATGAATATTTCAGGCATTTATGTCTGAGATTCTATATCAGATCC TCATGTACACAACTATATGTTTTTTCTTTTTTGTTTCCACCTTTTATGCTTGCTATTTTGGTGCATATGCTAAGGTCTTCATTGCATTATTGATACTACA TATACTTTATCTAATAAACTAGGAAAGAAGTAACATGAAGATTAATCATGTTTAATTTTGTCAAATGAGTAATGCTTTATGAAACCCCTTCCCCAAGTAT ATTTATATTTCAACAAACCTTGTATGCCAATGCTTAATTTCGTACCAATCGGGCGTTGGTTCAAGTGGTACATGCTTGATTCCCCTTAAGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_141324; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_392531
| Blastp | Protein NCA1 from Arabidopsis with 65.59% of identity |
|---|---|
| Blastx | Protein NCA1 from Arabidopsis with 65.59% of identity |
| Eggnog | RING(ENOG411005M) |
| Kegg | Link to kegg annotations (AT3G54360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419756.1) |
| Pfam | Tetratricopeptide repeat (PF13181.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |