Ll_transcript_392535

• Id Trinity: TRINITY_DN45922_c2_g2_i4
• Name Transcript: Ll_transcript_392535
• Sequence: CGGAATCCACGGTAGAGAAAATATTAAAGATAGAAGGCACTCCAATTGCACCTTCATTTCCAAAGAAACACAACACCGCTACACGACGTCGTTTTCAATT TCCAGGTTCTCGATCAATATGAAGCCAGTTTGTCCTTTTGTCAAAGCTGCTCGCCCGGATGATAATACTTGTAAAAGATCCGGTGAAAACTCAGTTAAAC ATCAGGTAGAGCCTGAGAATAAGCTGAAGAAAGAGGTTAGCAACTCAGCTAGTACTTCGCCAAAGTGCCCTTTTGGATATGACTCTCAAACATTTAAGAT CGGTCCTCTTAGCTGTATGGTATGCCAGGCACTTCTATTTGAGAGTAGCAAATGTGTGCCATGTTCTCATGTTTTCTGCAAGTATGTATCATTCCCCCCT CCCGTGTTTATTTTCATGAATCTATATTGCATATTCTGTTAACTCGTTTCTGATATTCTAATCATCTGAAATTAGAGCATGTATATCACGCTTTAGCGAC TGCCCATTATGTGGGGCGGATATTGTGAAGATCGAGCCTGATGCTGAGCTTCAGGGTGTAGTTGATCGCTTTATTGAAGGCCATGCTAGAATCAAAAGGT CTGCCAATTCCGGCAAACAAGAAGAAGAAACAGAAAGTAAACCAGTCATATATGAGGATGTGTCTCTGGAAAGAGGTTCTTTCTTGGTGCAACAGGCCAT GAGAGTAAGTATGGACTTTTAAAATATTGTCTTATATCTGAAGGAGTAAATAAAGTAGGATCCTTGAAATTTTTGTCATTAATTATTATCTTCATCAATA ACAGTGTTACCTGAAAATGATTTTAATAACTCTTGCTACATTCTAAGCTGGCATGTATTATTGGTTGTACTGCAAAAATCTTTATCCGGAAGTGGCATTG TTGACGGGCTCTGTTGAAGGCTTGAAGCTACTGCTTTTTATTTCACTTAGTTCATTTTATACTCTGTTCTACCACTTGATAATGAAGAGTTTGCAATATG CAATTCATAAACAGGCATTCCGTGCTCAGAATTTAGAAAGTGCCAAATCAAGACTCAGCATCTGTGCAGAAGACATTCGTGGTCAGTTAGGAAAAGTGGG TAACACTTCAGAGTTATGTTCACAGCTTGGAGCAGTTTTGGGCTTGCTTGGGGACTGCTGCCGAACAATGGGTGATGCTAGTTCTGCAGTTGCTTATTTT GAAGAAAGTGTTGAATTTCTATCGAAGTTGCCAAAAGATGATTTGGAGATTCAACACACACTATCTGTTTCACTTAATAAAATTGGAGATCTTAAATATT ATGATGGAAACCTTCAAGGTGCAAGATCTTACTATTTTCAATCTTTGAATGTTCGCCGTGATGTCATCAAGCATACTTCCAATGTTCCAGCTCAGGCCCT AGATGTTGCTGTTTCTCTTGCAAAAGTTGCGGATGCAGACCGAAATCTCGGGGATGAAAAGTTGGCTACCGATGGATTTCAAGAAGCCATAGACTTGTTA GAGTCACTCGAGTTGAACTCAGAAGCCAGCCGCCTTGATCACCGGAGGCAATCAGTGATAGAGTTTCTTAGAGGACAACTTTCAAATAAACAAGAACATG TTGAGCCAACAATCTGATATAAGCACTCTCCAAGGTTATGAAGAAAACATCAATTACAATGCAATAAATGTTTTTCTATGGGACATGCCAAGTTTGTCAA ATAAGCTCAAGTTAATTAATGGAAGCACCTCTGATAGAGGAAGAAGAGATTTCAATGTTAATGAATATTTCAGGCATTTATGTCTGAGATTCTATATCAG ATCCTCATGTACACAACTATATGTTTTTTCTTTTTTGTTTCCACCTTTTATGCTTGCTATTTTGGTGCATATGCTAAGGTCTTCATTGCATTATTGATAC TACATATACTTTATCTAATAAACTAGGAAAGAAGTAACATGAAGATTAATCATGTTTAATTTTGTCAAATGAGTAATGCTTTATGAAACCCCTTCCCCAA GTATATTTATATTTCAACAAACCTTGTATGCCAATGCTTAATTTCGTACCAATCGGGCGTTGGTTCAAGTGGTACATGCTTGATTCCCCTTAAGCA
• Tissue: pods
• Gene name: LI_gene_141324;
• Additional information: details;

Expression of Ll_transcript_392535

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 0.1
• PS2: 1.4
• PS3: 0.3
• PW1: 0
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392535

• Blastp: Protein NCA1 from Arabidopsis with 70.26% of identity
• Blastx: Protein NCA1 from Arabidopsis with 70.26% of identity
• Eggnog: RING(ENOG411005M)
• Kegg: Link to kegg annotations (AT3G54360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419756.1)
• Pfam: Tetratricopeptide repeat (PF13181.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;