Ll_transcript_393079

• Id Trinity: TRINITY_DN45972_c0_g2_i1
• Name Transcript: Ll_transcript_393079
• Sequence: GAATTAACTACTGGCAGATTGAAATAGATTTAGATTTTTCGTCTAATAAAGAAGAAGAAAATTGCAACGGGGCCTAATAAATTGGAATAGAGCGTGTGGC CCAAAATAAATAAAAAGCATACCTCACTTCTGAGAAAACAAAAACAACGCAAAATCTTTAGACCCTTATTGCTACTTCTTCTCATTCCTTCTCTTCCAGA AAAAATGACAACCTTCGCTTTGATTCAGCGTGCACGAACCACAATGCTCTCTTCCTCCTTCAAGTCACGCACACACTTCATCTACGGCAATCACTGCTCT CAAACAATGACCATGTCTCTTAGTACCTCTGCAATTCCGAATGATTATCAGAGATTCCCTCCACCCTCTGATTCCACACCCTTTCACCCTCAAACTAACA CTAACCCCAACCAATGGCAGCATCAGCAACAACAACAGCGTCACCCTTATCCTCCTCAAAACCAGAGTCACTTTCAGCATGGAAACCCTCCTCCACCTTC TAATCAATTTTCGCACAATTACCAGAACCAAAACCCTCATGTTCAAAACCCTGATCAGTTGAATTATCAGAATAACTATCCTCCTAGTCGAGCACCACCC ATTTCTCAAAATCAAAATTTTCAGCCTCAGAAACCAAACTTTACTACACCCAATGCCCCCGATGGATGGAACAATCAGAACCCTAACCAGTGGAATGGCC CGAGTCAAAACCCTAACCAATTGCGCCCTCCTCCTCAGTTCCAAAACCCTAATCGGTTGAATAACCAAGCTTCTATTCAAGGCCAGGCTCAGGTTGCAGC TCCTTCACCTCCTCAACCTCCTTCAATCACTGATTTGACACGTTTGTGCCAAGAGGGCAAGGTTAAGGAAGCAATTGAGTTGTTGGAAAAAGGGGTCAAG GCTGATTCTAATTGCTTTGATCTTCTGATTGATTTGTGTGGAAAATCCAAATCTCTCGAGGATGCAAAGAAGGTGCATGATTACTTTCTGCAATCTACTT ATAGGAGTGATGATAAGCTCAATAACAAGGTGATTGAGATGTATGGAAATTGTAAGAGTATGACTGATGCACGCAGGGTGTTTGATCATATGCCTAATAG GAACATGGATTCTTGGCATTTGATGATTCGTGGCTACGCAAATAGTACTAATGGGGATGAGGCCTTGCTAGTGTTTGAACAGATGAATGAGTTAGGTTTG GAAATTACTTCAGAGACTTTGCTAGCAGTGTTAAATGCTTGTGCTAGTGCAGAGGCTGTTGAGGATGCTTACCTGCATTTTGAGTCCATGAAAAGTAAGT ACGGAATTGAACCAGGGATGGAGCACTACATGGGGCTTTTGGATGTTCTTGGACAGAGTGGATATCTTAAGGAAGCTAAGGAGTTTATTGAGAAGTTGCC ATTTGAGCCCACTGTCACTGTTTGGGAGATTCTGAAGAACTATGCTCGTATTCATGGAGATATTGATCTTGAAGACCATGTTGTGGAGTTAATTGTTAGT CTTGACTCATCAAAGACTGATGCTAATAAGATCCCTACACCGCCTCCAAAGAAGTATACTGCAATTAGCATGCTTGAGGGCAAGAACAGAATCATTGAGT ATAAGAATCCCACTCTATACAAAGATGATGAGAAGCTAAAAGCTCTGAGTGGGATGAAGGAAGCCGGATACGTTCCTGATACAAGATATGTTCTCCATGA CATTGATCAAGAAGCAAAGGAGCAAGCATTGCTCTATCATAGTGAGCGTCTAGCAATTGCATATGGTCTTATTAGTACTCCACCAAGAACGCCTCTTAGA ATCATCAAGAACCTTCGTGTCTGTGGTGACTGTCACAATGCCATCAAGATCATGTCCAGGATTGTAGGGAGAGAATTAATTGTCAGAGATAACAAAAGGT TTCATCACTTCAAGGATGGAAAATGCTCTTGTGGGGATTACTGGTGAAGGAAACATAACTCCAAGCTACTCTACACTTAAATGAATATCATTTTCTTCCT AGAGCCCCCCTTATTGTGTTACAGGATGACAAATGTTGTGCTTGGAAGCTCCGCGACTGCTAGAATAGGAGATAAACTATGCCGTATACATCGATTTTGA ACGCCTTCATATCTTGTTCCGATATTCATTCAATTATTGTCTCCCCCTCTGCCTGCTCAGTTCATAAATTTGTTCCCTTTTTCTCTTGTGTTCCAGCAAC ACAAAGTTTAGCTTTATTAACTGATCCATGGAAGTATGTAGAACAAATTTAAAGTTGTTTTGATATGGTAGATGTTTACAAACATCTCTTTTCTTGGTAA TATTGTTGTCCTTCCAAATTACTTATGTACAGTCCCTGCCAGTGAATCACAATTTTGGATCACATGGCAGTTGCTCCTGATCTTTATTCTTCAATTCTAA ACATGTGGAAAGCAAATGAAACTCTGAATTTGTAATGGTGGAGAGCATGAAATAAATTAACTTCAGTATAGGGTAAAGCATGATGTTAGCAGAAAAAAA
• Tissue: pods
• Gene name: LI_gene_141601;
• Additional information: details;

Expression of Ll_transcript_393079

FPKM

• PAB: 2.4
• PNAB: 3.8
• PS1: 3.6
• PS2: 1.4
• PS3: 2.2
• PW1: 2.5
• PW2: 2.2
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_393079

• Blastp: Pentatricopeptide repeat-containing protein At2g15690, mitochondrial from Arabidopsis with 48.33% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g15690, mitochondrial from Arabidopsis with 61.39% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G15690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445780.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;