Ll_transcript_393080

• Id Trinity: TRINITY_DN45972_c0_g2_i2
• Name Transcript: Ll_transcript_393080
• Sequence: CAAAATCCTTATACTGTTATACCCTAGTTACTCTCCAAATAAACCTTTCTCTCTTCCTTCCAGAACCACACTACTCTCATTTCACTCCAAAAAATGGCGA CGTTTACTTTGATTCAACGTGCACGAACCACAATGCTCTCTTCTTCCTTCAAATCACGCACACATGGTAACCACTATACCCCAACAATGACCATGATGGC TCTTAGTACTTCTGCAGTTCCAAACGAATATCAGAGATTCCCTCAACAACATTCACCACCCTCTGATTCCACACCCTCTTATTCTCAAACTAACCCTAAC CAATGGCAACAGCACCAGCCACAGCGCCACCCTTATCCTCCTCAGAACCAGAACCATGTTCAGCATGGAAACTCTCCTCCTCTTCCCAATCAATTTTCTC ACAGTTATCAGAACCAGAACCAGAACCCCAATGAACGAATCCCTAATCAGTGGAATCATCAGGTTCATAATAATTACTCGCATAATCGAACACCACCCAT TTCTCAAAATCAAAACTTTCAGACACCCATTTCTCAAAATCAAAATTTTCAGACACCCACTTCTCAAAATCACAATTTTCAGACACCCACTTCTCAAAAT CACAATTTTCAGCCACCCATTTCTCAAAACCCGAACTTTCAGACACCCAATACCCCTAGTCGATGGAGCAACCAAGACACTAACCAGTGGAACACTCAGA GTCAAAACCCTAACCAATTGCGCCATCCTCCTCAGTTTCAAAACCCTAATCGGTTGAATGACCAAGCTTCTATTCAAAGCCAGTCTCAAGTTGCAGCCCC TTCTCCTCCTTCTACTCAACCACCTTCAATCATTGATGTGACGCGTTTGTGCCAGGAAGGTAAGGTTAAGGAAGCAATTGAGTTGATGGAGAAAGGGGTC AAAGCAGATTATAATTGCTTTGATCTTCTGATTGATTTGTGTGGAAAATCCAAATCTCTCGAGGATGCAAAGAAGGTGCATGATTACTTTCTGCAATCTA CTTTTAGGAGTGATGATAAGCTGAATAACAAGGTAATTGAGATGTATGGGAATTGTAAGAGTATGACTGATGCACGCAGGGTGTTTGATCATATGCCTAA TAGGGACATGGATTCTTGGCACTTGATGATCCGTGGCTACACGAATAGTACTAATGGAGATGAGGCCTTGCAAGTGTTTGAACAAATGAATGAGCTGGGT CTGGAAATTACTTCGGAGACTTTGCTTGCGGTCTTATCTGCTTGTGCTAGTGCAGAATCTGTTGAGGATGGTTACCTACATTTTGAGTCCATGAAGAGTA AGTATGGTATTGAACCAGGAGTTGAACACTACATGGGGCTTTTGGATGTTCTTGGACAGAGCGGATATCTTAAGGAAGCTGAGGAGTTTATTGAGAAGTT ACCATTTGAGCCCACTGTCACTGTTTGGGAGACTCTGAAGAAATATGCTTATCTTCATGGAGATATTGATCTTGAAGACCATATTGAAGAGTTGATAGTT AGTCTTGACCCGTCAAAGGCTATTGCCAATAAGATCCCGACACCGCCTCCGAAGAAGTATACTGCGATTAGCATGCTTGATGGCAAAAACAGAATCATCG AGTTTAAGAATCCTACTCTTTACAAGGATGATGAGAAGTTAAAAGCTTTGAGTGGGATGAAGGAAGCTGGATATGTTCCTGATACAAGATATGTTCTTCA CGACATTGATCAAGAAGCAAAGGAACAAGCATTGCTCTACCATAGTGAACGTCTAGCAATTGCTTATGGTCTTATTAGTACACCACCTAGAACACCTCTT AGAATCATAAAAAACTTGCGTGTATGTGGTGACTGTCACAACGCTATCAAGATCATGTCCAGGATTGTAGGGAGGGAGTTAATTGTCAGAGATAACAAAA GGTTTCATCACTTCAAGGATGGAAAATGCTCTTGTGGAGATTACTGGTGAAGGAAACATAAACTCCAAATTCTACACTTGAACAAATATACCTCATCCAT GTTATGCTTGGAAGCTTCAGCACTGCTAGGGATAGGAGATGAATTATGCTGTATCCAATGATTTATAATACATTTGTATTCTGTTCAGATATTCATTTAA TTACTCTCACTCTCTCTGCCAGTGCATAAATTTGCTCCTTCTACATCTATGTCCCACCACCATTAAATTTAGTTTTATTGACTAATACATGCAAATATGT AGGACATGTTTCGAGTTTTGTTTTAGCGTGGTAGATGTTTCGGAGTCTATACTGAATTCAGGGACTTTATGCAAACATCAATAATAATGACTGCCCGATC TACCTGCAACCAATGGCAGATGTTTTAACAATATACCAGAGACTACAGATCACAAGCTATATTGTTCATAACATTCTATAGTGAGCCTGGTACGAGCAAC CAGTATACTCTGTTCATGACATTCTATAGATTGCATTGTGATGGTTTACAAGGAAAGCAGTCAGTTATCTTCTCCCCAATTTTTCTTGTGTAACCAATGG TATCCAT
• Tissue: pods
• Gene name: LI_gene_141601;
• Additional information: details;

Expression of Ll_transcript_393080

FPKM

• PAB: 2.4
• PNAB: 6.8
• PS1: 7.9
• PS2: 4.8
• PS3: 7.8
• PW1: 3.9
• PW2: 4.1
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_393080

• Blastp: Pentatricopeptide repeat-containing protein At2g15690, mitochondrial from Arabidopsis with 46.73% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g15690, mitochondrial from Arabidopsis with 45.24% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G15690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424142.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;