Ll_transcript_392762

• Id Trinity: TRINITY_DN45979_c0_g2_i8
• Name Transcript: Ll_transcript_392762
• Sequence: CTACTCATGACCTCCCCTTGATATCTATCACAGACGAATGATATTCCATGCTTCCACGTTTTTGCACAGTGGTCCTTTCTCATCAATACACAAATATATA AAAAAAGAATACATAATAAACGACATTAAAAAAAGAGACGTAGAAGAAAAAAACGAATAAACCCAAATTCGCATCATCTTCTAGATCTGCTATCTCTTCG TTTCTTCCATATCCTTTCAATTTCAATATCAATCCTCCTTCTTCTCCATCTCCAAAGTGGAATCCCTCTTCACAGGTTGTGAATTGAATGGAAGGAACTG GAGGTAGCAGTGCCTCAGCTGCTGCACCCGTGAACCAATGGTTGCTGGAATTTTCGAGGCGATTTCAGCATTATCTTGATAAATCAACCCCACACTCTAC GTATAGATGGATCGGGACTGTTGGTATTGCGTCAATCTATGTTTTGAGGGTTTTTTATTTACAGGGATTTTACATCGTGTCTTATGGTCTGGGAATCTAT TTGCTGAACCTGTTGATTGGGTTTCTGTCACCTTTGGTTGATCCCGAGCTGGAGCCTTCTGATGGGCCTACGCTGCCAACTAAAGGTTCTGACGAGTTCA AACCATTCATTCGCCGGCTTCCTGAGTTCAAATTTTGGTAATTTAGGAATTTAGTTTTATGCCTAATGCATTATCATAATTGCTTCAAAGTCTTCCTTTG TCATTTTAAGTTCCTTTTATTTTTTCTAGAAAACTTTGATTAAATTTGTAATTCATGTTTATATTTGGTGCTCCAATGCTTGTTGTCTAGGCACTCACCT TTTTCGTGATTTGACTTGTAGTAACTTGTCTATGGTAATCTGTCATACCATGTATGACTCTGATTTCTGAATTCCAGCTGGTAGTATAAGTTTGCACACC TAAGATCTAATAGCCATCTAGTAAGTTTCCCAAATTTTCCATTTACTTTTCAAGAAAGCATTTGATTGATCATTGGAAAATAACTCCTACCTTCAGAAAG ATGGAAATATTAACTTGCTATTTCTTGCTCCCAGCTGCCATAGCCTGTCACTTCAGCTAATTGTTATCGGCTTCTGGCTTCCGGAGCCTGTTGGTCATTG CACATAGCAAAAGATGTTAAGATGTTTACTTGGAAATGCTTCTTTTTATTTTTTTATTTCAAAGTTCCTTAAAATATAAGCCTCACTGATGGCTATATTT TCCTGAAACATAAACATCCAGATCAAATTATTTGGCCTTAATTGTCTGCACATAAGAAGCACAGAGGCTTTACAGTGGTTGCTGGGTTGTATCCATGTCA AACACATCTGTATCTGACACTCCCGCCTATACTTTTACGATGTTTTATATCTACTTTTTGGATATTATACCATTATAGATCGGAATGTCACAATGATTAG CTAAAGATTAGCATTTTATTTTGTTTACAATGGCTCTTGCTAAGTTTTCTAACTTTAGTTTTTTTACTTTAGATTCATGCTTTCATGTTAATCTTATATC AATTTTATATCTTGTACCATAGTCGCGATAACATTTGAAATACGTCATAGCCCCATGTTCCTGATGTGTTGGGTCCATGTAACATGTTGTTCCTTGCTTT CATTTCCCTGGCAAATTTCATGTTTTCACAAAACCATGGTTTTAAGAATGCAAGTCACTAAAAGTTATGGCCAGCCTCTATTTCACTGTTAATTTCATTG CTATTGTTGGTGCAGGTATTCTTTCACGAAGGCCTTATGCATAGCATTTGTGATGACTTTCTTTTCTGTATTTGATGTTCCTGTCTTCTGGCCCATATTA CTCTGTTACTGGGTTGTTCTATTTGTGCTTACAATGAGGCGCCAAATTGCACACATGGTCAAATACAGATATATTCCATTCAACCTTGGAAAGCAGGTTT TCTTCTGATTAAATTGCTTTTCATCACTCACCTGCTTACACTTGTTATTTGCTTGTACATTAAGTACATCCAAAACTAGTTTTGCTTCATTTTGTGTCAT TTTAAATACAGGAAAGATAATACTATATTTTTAAAATATATTTTACAGAAGTATGGTGGCAAGAGATCTTCTGCTGGTAGCAGTGGCACTCGTGCAGACT GAAACTAAGCTGTTCCATGATTTGAAGAATGCAGATTTCAAAGATAGGTTTTGTGAGCATTCAGGGTAGTATGTAGTCAAAAGTATTATGAAAATCTTAT TGTGTCCACTAGTTATATGATACTGGAAGACATGCTAATGTTGGCAGTGAACTTTATGTTCATATACATCAGTATTTGTTTCAGTTTTAGATTTTCTTGC AAATGAATTCTTGTATTGTGATGCTTCTCTTGCCTGGTATTTTTTTCGATAATCCAAAGGCAAACTTTTAGCAGCCTTTTCATTTTTTCAGAAAATCTTA CTGTTAAGGATATGATTTTGAGTGTTAAAATTTCCCCCACTTGTGATTTGTCAAAAATGTAATGTGCATTTAAGAATTAGCCGAATTTTATGCACATGCA GCTTATTCTGATGCTGCCAATTCCAACATTAAAGTACCTCCTGTTGAAGTGTTTGTGATTAGAGTTGAAATTGGAACACGTGCTTTATATTTTGGCCG
• Tissue: pods
• Gene name: LI_gene_141665;
• Additional information: details;

Expression of Ll_transcript_392762

FPKM

• PAB: 1
• PNAB: 0.4
• PS1: 0.4
• PS2: 0.3
• PS3: 0.2
• PW1: 0.1
• PW2: 0.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_392762

• Blastp: Protein RER1B from Arabidopsis with 73.5% of identity
• Blastx: Protein RER1B from Arabidopsis with 69.05% of identity
• Eggnog: RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)(COG5249)
• Kegg: Link to kegg annotations (AT2G21600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413892.1)
• Pfam: Rer1 family (PF03248.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;