Ll_transcript_282014

• Id Trinity: TRINITY_DN46106_c0_g9_i1
• Name Transcript: Ll_transcript_282014
• Sequence: CACAGAACCAAATCATATCAAATATATCTGAAGTTATCTAAGAGGAACATAATGATGTTTGGCTTGGGTTTCCACTGTCACAAATCTTTGCTAATGATTA TTGTTTTAGCTTTTCTTGGCTTAATCTCTTTTCCAGCTGAAGCAGCAATAAAGAAATACCAATTTGATGTTCAAGTGAAGAATGTGAGTAGACTATGCCA TGCAAAACCCATTGTAACAGTAAATGGGAGGTTTCCAGGGCCAACAATTTATGTTAGAGAAGGAGATAGAGTTCAAATAAATGTTACCAACCATGTTAAA TATAACTTGTCAATTCACTGGCATGGACTTAAACAATATCGTAATGGTTGGGCTGATGGACCAGCTTATATTACACAATGTCCAATTCAGTCTGGGAACA GCTACACTTATGACTTCAATGTCACAGGGCAAAGAGGAACATTGTGGTGGCATGCTCATATTCTTTGGTTAAGGGCCACAGTTTATGGTGCAATTGTCAT CATGCCTAAACCAGGAACCCCTTTTCCTTTTCCACAGCCACAGAGAGAGTTTGAAATTTTGCTAGGAGAATGGTGGAACAATGATGTGGAAGAGGTAGAA AAGCAAGGGTTCAAAATGGGGTTGCCACCAAATATGTCTGATGCACACACCATCAATGGGAAGCCAGGGCCACTCTTTCCTTGCTCAGAGAAACATACAT ATGCAATTGAGGTAGAACAAGGGAAGTCTTACTTGCTGAGAATCATCAATGCTGCTCTCAATGATGAGCTTTTCTTCGCCATTGCCGGACACACATTGAC AGTAGTGGAGGTTGATGCAGTTTACACAAAACCATTCACTACACAATCTATACTAATTGGACCTGGTCAAACCACCAATGTTCTGGTCCAAGCCAACAAA GTACCAGGTAGATATTTTATGGCTACAAGGACATTTATGGATGCTCCAGTCCCAGTTGACAACAAAACTGCCACAGCTATTCTCCAATACAAAGGCGTTC CAAACACTGTACTTCCCTCTCTTCCTCAACTACCAGCTGGAAATAACACAGATTTTGCTTTGAACTACAACAAGAAACTAAGGAGCTTAAACTCTGCAAA GTACCCTGCTAGTGTTCCCCTCAAAGTTGATAGAAACTTGTTTTACACTATTGGTTTAGGCAAGAACTCTTGCCCCACATGTGTGAATGGAACAAGGTTA CTTGCTTCCTTAAACAATGTATCTTTTGTGATGCCACAAACAGCACTTCTTCAAGCTCACTACTTCAAAATCAAGGGAGTTTTCAGAACTGATTTCCCTG AAAAGCCTCCAACCCCTTTCAACTATACCGGTGTGCCACTAACTGCAAATCTTGGTACTTCAACAGGAACAAGAGTTGGAAAGATTGCCTTTAATTCTAC AGTGGAGTTGGTTTTGCAAGACACAAATCTGCTCACAGTTGAGTCACACCCTTTCCACCTTCATGGATATAACTTCTTTGTGGTTGGAACTGGGGTTGGT AACTTTGATCCTGCTAAAGACCCTCCTAAATACAACTTGGTAGATCCTGTTGAGAGAAACACTGTTGGGGTTCCCACTGGTGGTTGGACTGCAATTCGTT TCAGGGCTGATAATCCAGGTGTTTGGTTCATGCATTGTCATTTGGAACTGCATACTGGTTGGGGGTTGAAAACTGCATTTGTTGTAGAAGATGGTGAAGG AGAAGATGAATCTATTCTGCCTCCACCAAAGGATCTTCCAACATGCTAATCATAAAACAAATTGTGAAGCAGCTCTGAATGCATGGAATTGTATTCACTA TCCACTTTCATATTTCAATGATTCATTTGTACTATCTGCTAATACTTCCTGCAAAAGTTGTGGAGGTTTTTTAAGTACCAGATTTGATGTCAAAAATAAT GTAAACAAAGTTGTTTAAAAGCAATGTTCTTTCATGCAACTTGAAAAGCTTAGGGTCAGCTTGTCAATTTGATGTTCTTGACAAAAAAAATGATTTACAT AAAATCAAAAACCGCAAAAAGTGAATTTAAGTTGTTTGAATGTAATATTGGAAAAATGATGATGAATGACATAAAACACATTTGGAAAATATATATATTG GGGTAAACAATTATCTTAAAAATGTTTGATAATGAGTATTGCTTCTCCATGTTTCACCATTGTTCTTCCTATAATGATCTTAC
• Tissue: pods
• Gene name: LI_gene_142288;
• Additional information: details;

Expression of Ll_transcript_282014

FPKM

• PAB: 3.4
• PNAB: 3.6
• PS1: 3.4
• PS2: 9.5
• PS3: 14.4
• PW1: 6.3
• PW2: 14.3
• PW3: 9.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282014

• Blastp: Laccase-11 from Arabidopsis with 77.94% of identity
• Blastx: Laccase-11 from Arabidopsis with 77.94% of identity
• Eggnog: Multicopper oxidase(COG2132)
• Kegg: Link to kegg annotations (AT5G03260)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421059.1)
• Pfam: Multicopper oxidase (PF07732.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;