Ll_transcript_281172

Id TrinityTRINITY_DN46115_c3_g4_i2
Name TranscriptLl_transcript_281172
SequenceGTTAGTCACATTTCATTATTAATATATCGAGAGTGAAGAAACACAATCGGAAAATCCTAAATAAAGTGCTTTTCTTTTTTTCATTCTATTGATAAAAAAC CTAAACTCAACTCAGCACAACACAACACAACTCACATTTTGAAAAGCAATTAATCGAAACGCAGAAGATGGAGATGACGTCACCTTCTTCTTCATCGAAA GCGTTATCAATAACACCAGGTTGTAGGGTTTTGAGTGATCAACATATATGGAAGCGACTCCAAGATGCTGGATTCGATGAGGAATCGATTAAGCTCAAAG ACAAAGCTGCTCTTGTTTCCTACATCTCTAACCTCGAAGCTCAGATATATGACCACCAGCACCACATGGGCCTTCTCATATTGGAGAAAAGGGAATTGAC TTCCAAGTATGAGCAAGTTAAGGCCTTGTCTGAATCATCTGAGCTAATGCAGAAACATGATTCAGCCATGAACAAATCTTCATTAACTGAAGCAAAGAAA CGGGAAGAAAGTTTGAAGAAGACAGTGGGGGTCAAAGAAGCATGTATTGCAAGTCTTGAGAGGGCCTTGAATGAGATGCGCTCTGAATGTGCTGAAACAA AATTTGCAGCTGAGAGTAAACTTGCTGAAGCACATCAATTGATTGATGAAGCACATAAAAAATTTACAGAGGCTGAGGCTAGGGTGCATGCAGCAGAATC TTTGCAAGCAGAGGCTAACCGATATAACAGTATTGCGGAAAGGAAGCTTCACGATGTTGAAGCACGTGAAGATAACCTCAGGCGGAAGATCATGTCTTTC AAGTCAGATTGTGATGAAAAGGACAAGGAGATTATTCTGGAATTGCAATCTCTTTCTGAAAGGCAAAAAGGTTTACAGCAAGAACAGGAAAGGTTACTTC AGTCTCAAGCCCTGCTCAATCAGAGAGAGGATCTTCTTTTTAGTAGATCTCAGGAACTAAATCGTCTTGAAAAGGAGTTAGAAGACACAAAAGTGAAAAT TGAAAAGGAACTTGATGCCCAGCATTATGAGAAAACCAATCTGAAAGTGACTGAAGCCACCCTAACACAAAAACAAGAGGCACTCACTAAACGGGAAGCT GAGCTGAACAAGAAAGAGAAAGAGTTGCTTGAGTTTCAAGTGAAACTTGCTTGTAGAGAATCTGATGAAATTCACAAAGTTATAAATGACCAGGAAGCTG CATTGAGGACTAGAAAATATGATTTGGAAGCTGAGTTACAAATGCAGCGCAAACTGGTTGAAAATGAAATTGAGACAAAAAGACGAGCTTGGGAGTTGAA GGAGGTTGATCTTAAACAACGGGAGGATCAAATCCTGGAAAGGGAGCATGAGTTGGATGTCCTGTCAAGGTCACTGACTGAGAAGGAGAAGGATCTGGTG GATATATCAAGTGCTCTCGAAGAAAAAGAACAAAGATTGAGAGCTGCTGAGGAGGAGCTTGAGTTAAATAAATCCCTTTTGCAAAAGGAGAAAGATGAGA TTGAACAAACAAAACAAGATCTGCAGAAGTCTATGTTATCTTTGGAGAATAAACTACAGATAGTTGATAATGCAAAGGAGAAACTGGAGACCATGAAAAG TGAAACAGGTGACCTGTCAATTTTAGAAGTGAAGCTAAAGGAAGAGATTGACCTTGTAAGGTCTCAGAAGCTGGAGCTTTTGGCCGAAGCAGATAAGCTA GAAGCCGAAAAGGCAAAGTTTGAAGCTGAGTGGGAACTTCTTGACGAAAAAAAGGAAGAGTTGCAGAAAGAAGCAGAACTCATAGCAGAGGAAAGGAATG CAATATCCATTTTTATGAAGAATGAGCGTGATAGGCTTAGAGAAGAGAAGGAAAATGTGCGTAATCAATACACCCAAGACATGGAGTTGCTTGCCAGCGA ACGAGAAAAGTTCATGAACAAGATGGCCCATGAACATTCTGAGTGGTTTGGCAAGATGCAGCAAGAGCGAGCAGATTTCTTGCGGGACATTGAGATACAA AAGAGGGAGTTAAATAACCTTGTTGACAAGAGGCGTGAAGAAGTGGAAAGTTATTTGAAGGAAAGTGAAAAGGCTTTTGAGGAAGAAAAGAACAATGAAC TTCAATATATCAATGCCCTTAAGGAAAAAGCAGAGAAAGAGTTGGAACAGGTTTCCTCTGAGATGGAAAGGCTTCAAACTGAGCGGTCAGAGATAAATTT GGACCGTGAACAGAGAAATAAGGAATGGGCTGAAATAACTAAGTGCATTGAGGAACTTGAAGTTCAAAGGGATAAGCTACAAAAACAGAGAGAACTTTTG CATGCGGATAGAATCAAAATTCATGCTCAGACTGAAGAATTGAAAAAGTTAGAGGATTTGAAAGTTGTCTCAGATGACATTGCTATCACTAGAATGCTTA AATCTGATATGGAGTCTAACCAACAAAAAATCTCTGCTTGGAGAAACTTGAAGCATCAGACTTTTACACATGGTGGTTGCCTGAATGCATGTGAGGAAAT AGATGCAGGTAACATGGGAAATGGTTTTGGTACTCCTTTTGTGCAGAAGTCATCCAGTCTTTCTCCTCCTAGTCCTGTTCGATTCTCATGGATCAAACGA TGCACAGAACTAATATTCAGAAATTCTCCTGAGAAGCTACTCATGGAAAAAGATGATTTGCATTTGGTTTCTGGTACTGGTAACATTAGCAATGGGCAAA AGCACTTGGAAAATGACAAACTTTCACTTGGGGAACCAAAAGTAATAGTTGAAGTACCGGCTCGAAATGAAGATGTCAGCAGAACAAGCGAGTTCGAATC TGAGACTAAAAATGCGAATGGAGCAAGTGCACTCTCGTATACGTATGAACATCAAGTGGGGATACGGAAAAGAGGAAGTGAGAACATTAGTAATGAAGTT GGTGATCCACGTATAGATCTGGGCCAGAATAAGAAACAGAGAGCAGAAGGGCAAACCACCAAAAAACTGTTGGATACAACAGAGACCCAGCATTTATTGA TGACATCAAATCAAACACAAGGGAGCATTGAAGAAACTCACGAAGTAATAGTGGATAAGGTTATTCATCTATCAGAAGTGACTTCAGAGAAATTTGATGC TCTCACTTCCACTATGCCTAATCAAGAGCTGAGAGATAATTTGCAGAATGCTACACTAAGAGTGGATAAGCTTCATGGAGAAACAAATGATCAATCTAAT TCTAAAACTATTCAGGAAAATATTTTACCATGTGGCTCCGAAGTAGATGGAAAAAAAGAGGAAACATGCAAAGAAAATAATGGACATGTTCCGGAGCAGT GTTAGGATCCTAACACAGTTTGGAGGGACTGTTCCTTTGTAAAGTTGATTGATTGATTACTTGGAGATGTCTGCTGTGCTGTGTGTACACATTCATTATA TGGATGCATTTGCAAAATAGTGAGGTAGTGAATGTTCTGTTCATATAATAGGGTTCATAAAATAGGTATGTTTTGTACTCCGAGAGGAGTCACTAAAAAA AGGAGATAAATGGTATGTGCTTTTTAGCTTTTGTAAAATCTGGCAGTGTTTGCTAGCAAAACTTTGCAAAGTTGGTTTTCTGACTTAGTGGTTTTTCTTT AATTTGTGACATTGATGGTTCATCATTATTAGTGCTATTGAGATGTTTGTGTTAAAAAAAAAAA BLAST
Tissuepods
Gene nameLI_gene_142319; 
Additional informationdetails; 

Expression of Ll_transcript_281172

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_281172

BlastpProtein CROWDED NUCLEI 4 from Arabidopsis with 46.77% of identity
BlastxProtein CROWDED NUCLEI 4 from Arabidopsis with 46.53% of identity
Eggnognuclear matrix constituent protein 1-like(ENOG410YA8H)
KeggLink to kegg annotations (AT5G65770)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421667.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;