Ll_transcript_282145

• Id Trinity: TRINITY_DN46155_c3_g2_i1
• Name Transcript: Ll_transcript_282145
• Sequence: GTTATCCTGGCTCGAAATTTCAGGTATAATCTATGCATGAAAATTTATTTAAGAGCAGGTAGCGTTATGTAGAAAAATACGTAGAAAACGTATTTGAAAA GTTAAATACATGAGATTTAGTGAGAGAGAAAAAAAGGTAAATTATATGGAGTGGGGTGAGAGAGAAAGAAACGGGCACTTATAGAAATAATAATCCACGG AACCTTTCACCCCTCATTCAATGCTTTACCAAACTCCTCATCCATTTTCCACTTTCAATTTCATCCCTTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCAT CTCTACCCTTCAAACTACATCATCTCTTCCACTCTCTAAGGTTGGTACAGAAATGGATTGCATTGAAGGTGCGTTGAAGACCAGTTTAAGGAAAGACTCC ACCGTGAAATTGAGCCCACAAACTTTGATGGAGGATTTGAATGTGCAAATTGGCACACCCTGTGAAGATTTTTTATTTGTGGATAACCTCCTTGACTTCT CGCACGTGGAACAACAACAAGACGAAGAAGAACCTAAACAAGAAGAAGATAAAGATGAAGGCTCTGCTTGTGTCTCCCCTCAGAAAAGCAACGAAATTTG TAATCTTTCTCTCAAAGACGAATTTCTTTCCTTACCCACTAGCGACCTCAGTGTTCCGGAAGATGTTGCTGATTTGGAGTGGCTATCTCATTTTGTTGAG GATTCATTCTCTGAATTCCCCACCGTAACAACCACAACAACAACCATGAGGGAGAACCCAAAGACCATTTTTGCTGTGAAAGAAGCAAAGCCGTTAAACC CGGTTTATATTCAACCATGTTTCAAAACCCCGGTTCCAGCAAAGGCAAGAAGCAAACGAACCCGGTCCGGTATTCGGGTTTGGTCACTCGGTTCACGTTG CTTCACTGAGTCTTCTTCAAGCTCCACTTCCTCCACCTCTTCCTCTTCTTCCCCAACAAGTACTTTGCTAAACTACGCCGACTTGGTCCAAAACCTCGAC CAGGTTTGTTCTCCGCCGAAAAAACCAAAGAAAAGGGTACCCTCTCACGGTTCCGTTCAGACACCGCGACGGTGCAGCCATTGCGGCGTTCAGAAAACTC CTCAGTGGCGAACTGGGCCGTTGGGAGCGAAAACTCTCTGCAACGCTTGTGGAGTCAGGTTCAAATCGGGTCGGCTCTTACCCGAATACAGACCTGCTTG TAGCCCTACGTTTAAAACTGAATTGCACTCCAATCACCACCGCAAAGTGCTCGAGATGCGGCGGAAGAAGGAGGACACCGAAACCGGTTTTGCACCTCCT CCGGTGGTCCCCACTTTTTGATTATTAGAAAGAAGAAAACTAGGTAGAGAAAAAAAGGGCATAGATGTTAGACCCGACCCGAGTTAGGGTAACATTTTTT TTCTCTTAAGTTGAGTGCGGTAGGTGTTAGCCTTTGTAAGTGATAAGTGATTAGTAGACTTTGATTTCCAACTCATTTTGGCTTTATTCTTTTTAATATT TTTAATTTGGATGTTTTTCCTTTTTAGTTCTAAATATATATTTTTGATTTGAAGTAATGTAATGTAATGAGGTGGGTGTGATGAAGGGTGGTGGTGGTTT GGAAATGAAACTGTTGAAGATTTTAATTTTGGGGTGGGCGTTGAAAGGCATGGAATTTATGAAAGAACAGGGAAAGAGGTTTTTGTTGTGTCAGAGATTG TCTGTGACGTACTTTGTTGGGAAACTGAAGTATTTGGAAAGTAGTAACTGTGTATTGCGTAAAATGGGTGGATGCTATTCAGATCGAACGGCCCATTAAT CTTTTCCCTATAATCAAAACCACTAAAAACAAATGGGATGGTGCTTTCTTATCTTAAACTTGATTTGGACTTATATATAATACATTTTGGACTGACCTGT TTTGTTGAGTCATGGAATACCCCATTTTTCCATTGAAACAATAGGGTATCATGTTATTTCAGCTAAAAAAGCATGATATGTGGCAATTAAAGCAGATATA AATAATTAGGAAACTGTAAGTGTGTTACTTTCACAGTTAATATTGAGAATTTAAAAAACTGCAGACAAGTTCTCAAGTTGTGTTTACCCTTTAAAAAAGT CCAAAGGATATTCTCTCTTTCATTTTTATTGTTTTATTTTGAAATGGAGAATATAAGAGCAAAAGGAGGTATTTGAAGTAAGTGTTCACCGCCATGTCAG AGGGCCTTAATAAACAAATGAGAGGAATTTTCAAATTGGAATCTATGTTATG
• Tissue: pods
• Gene name: LI_gene_142592;
• Additional information: details;

Expression of Ll_transcript_282145

FPKM

• PAB: 11.5
• PNAB: 11.9
• PS1: 18.8
• PS2: 14.2
• PS3: 20.2
• PW1: 6.5
• PW2: 6.6
• PW3: 7.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282145

• Blastp: GATA transcription factor 5 from Arabidopsis with 47.29% of identity
• Blastx: GATA transcription factor 5 from Arabidopsis with 55.6% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (AT5G66320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444805.1)
• Pfam: GATA zinc finger (PF00320.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;