| Id Trinity | TRINITY_DN46155_c3_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_282150 |
| Sequence | GTTATCCTGGCTCGAAATTTCAGGTATAATCTATGCATGAAAATTTATTTAAGAGCAGGTAGCGTTATGTAGAAAAATACGTAGAAAACGTATTTGAAAA GTTAAATACATGAGATTTAGTGAGAGAGAAAAAAAGGTAAATTATATGGAGTGGGGTGAGAGAGAAAGAAACGGGCACTTATAGAAATAATAATCCACGG AACCTTTCACCCCTCATTCAATGCTTTACCAAACTCCTCATCCATTTTCCACTTTCAATTTCATCCCTTTCTTCCTTTCTTCTTCTTCTTCTTCTTCCAT CTCTACCCTTCAAACTACATCATCTCTTCCACTCTCTAAGGTTGGTACAGAAATGGATTGCATTGAAGGTGCGTTGAAGACCAGTTTAAGGAAAGACTCC ACCGTGAAATTGAGCCCACAAACTTTGATGGAGGATTTGAATGTGCAAATTGGCACACCCTGTGAAGATTTTTTATTTGTGGATAACCTCCTTGACTTCT CGCACGTGGAACAACAACAAGACGAAGAAGAACCTAAACAAGAAGAAGATAAAGATGAAGGCTCTGCTTGTGTCTCCCCTCAGAAAAGCAACGAAATTTG TAATCTTTCTCTCAAAGACGAATTTCTTTCCTTACCCACTAGCGACCTCAGTGTTCCGGTACTTTTCTTTTCTTAATTTTCGCGAAAAGAACAGTTTTTT AAGGTTATTATGTGGTGGGTTTTGAAGAAAGTTGCTATCTTTTCAGGAAGATGTTGCTGATTTGGAGTGGCTATCTCATTTTGTTGAGGATTCATTCTCT GAATTCCCCACCGTAACAACCACAACAACAACCATGAGGGAGAACCCAAAGACCATTTTTGCTGTGAAAGAAGCAAAGCCGTTAAACCCGGTTTATATTC AACCATGTTTCAAAACCCCGGTTCCAGCAAAGGCAAGAAGCAAACGAACCCGGTCCGGTATTCGGGTTTGGTCACTCGGTTCACGTTGCTTCACTGAGTC TTCTTCAAGCTCCACTTCCTCCACCTCTTCCTCTTCTTCCCCAACAAGTACTTTGCTAAACTACGCCGACTTGGTCCAAAACCTCGACCAGGTTTGTTCT CCGCCGAAAAAACCAAAGAAAAGGGTACCCTCTCACGGTTCCGTTCAGACACCGCGACGGTGCAGCCATTGCGGCGTTCAGAAAACTCCTCAGTGGCGAA CTGGGCCGTTGGGAGCGAAAACTCTCTGCAACGCTTGTGGAGTCAGGTTCAAATCGGGTCGGCTCTTACCCGAATACAGACCTGCTTGTAGCCCTACGTT TAAAACTGAATTGCACTCCAATCACCACCGCAAAGTGCTCGAGATGCGGCGGAAGAAGGAGGACACCGAAACCGGTTTTGCACCTCCTCCGGTGGTCCCC ACTTTTTGATTATTAGAAAGAAGAAAACTAGGTAGAGAAAAAAAGGGCATAGATGTTAGACCCGACCCGAGTTAGGGTAACATTTTTTTTCTCTTAAGTT GAGTGCGGTAGGTGTTAGCCTTTGTAAGTGATAAGTGATTAGTAGACTTTGATTTCCAACTCATTTTGGCTTTATTCTTTTTAATATTTTTAATTTGGAT GTTTTTCCTTTTTAGTTCTAAATATATATTTTTGATTTGAAGTAATGTAATGTAATGAGGTGGGTGTGATGAAGGGTGGTGGTGGTTTGGAAATGAAACT GTTGAAGATTTTAATTTTGGGGTGGGCGTTGAAAGGCATGGAATTTATGAAAGAACAGGGAAAGAGGTTTTTGTTGTGTCAGAGATTGTCTGTGACGTAC TTTGTTGGGAAACTGAAGTATTTGGAAAGTAGTAACTGTGTATTGCGTAAAATGGGTGGATGCTATTCAGATCGAACGGCCCATTAATCTTTTCCCTATA ATCAAAACCACTAAAAACAAATGGGATGGTGCTTTCTTATCTTAAACTTGATTTGGACTTATATATAATACATTTTGGACTGACCTGTTTTGTTGAGTCA TGGAATACCCCATTTTTCCATTGAAACAATAGGGTATCATGTTATTTCAGCTAAAAAAGCATGATATGTGGCAATTAAAGCAGATATAAATAATTAGGAA ACTGTAAGTGTGTTACTTTCACAGTTAATATTGAGAATTTAAAAAACTGCAGACAAGTTCTCAAGTTGTGTTTACCCTTTAAAAAAGTCCAAAGGATATT CTCTCTTTCATTTTTATTGTTTTATTTTGAAATGGAGAATATAAGAGCAAAAGGAGGTATTTGAAGTAAGTGTTCACCGCCATGTCAGAGGGCCTTAATA AACAAATGAGAGGAATTTTCAAATTGGAATCTATGTTATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142592; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282150
| Blastp | - |
|---|---|
| Blastx | GATA transcription factor 5 from Arabidopsis with 55.74% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422188.1) |
| Pfam | - |
| Rfam | - |
| GO | - |