Id Trinity | TRINITY_DN46165_c0_g1_i9 |
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Name Transcript | Ll_transcript_282162 |
Sequence | ATTTTTATGAGTTTACGCATGCAGTGAATAGATTTAAGGAAACTCTCGGATGAGGAAACTAGAATCTAAGAGATAAATAATTTGGGCGTAAGACACCAGA GTTTGGGTTAAACCTCACTCTCAATTTCACCATTTTCACTTTCCCAAACCAGATCCGAATTATTTTGCGACCTAACTTACACCAAGGTTCGTTTTCTTAC GATCTACCATTCCTTTCATCAATTCTACCTTCTCCTTCTCTTTTCCCTTCATCAATTCACACGTTCCCAATTTTCTTTCTTTTTACTTCTTCGATTTTAA TCGAGATATTCATTAGCGCGATTTTGTTTGATCACGAATCGAGATATTCTGAACGTTTGTGTTTACAATTCACTTCCTCTGTTGTTCACTGGGAGATTAT TGGATTTTGATTTTTCTCAGGTGGTGATGTTGCGTTATGATCTTTGAACCAATTTGTGCACAGAGAATATGATACTCATTACTTTTATTAACTGAGTTTG TCTATTTTTTATGTGTTTCAGAGAAGGCAAGGTGCTTTAACATCTGAATTGTTGGTAAAATGGTTTCGTTTGAGATGGACGATAGAAAGAAGATTGGATT AGGATTAACTGGATTTGGTGTATTCTTCTCTTTCCTTGGGATTGTCTTCTTCTTTGACAAGGGATTGCTAGCCATGGGAAATATCCTGTTTGTTTCTGGG GTGTCCTTAACCATTGGGCTGAAATCCACTATGCAATTCTTCATGAAACGAAGTAATTTCAAGGGGACAATTTCATTTGGTATTGGATTCCTTATTCTCA TAATTGGATGGCCTATTCTAGGCATGATCATTGAGGCTTATGGGTTCATCGTTCTATTCAGTGGTTTTTGGCCTACACTGTCTGTTTTCATACAGAAGGT CCCTGTTCTTGGTTGGTTGTTTCAACAGCCATTTGTTCGATCGGTATGTATTTATTCATTATGAAATGACTTTGCCTGCGTTCTTCACTGAATTATCCTA TTCATTTACCATTCTGGGTGATACCATATCAATAATATTTTTCCACAAAAGTCATCAAGAAATTATCGATTTAAAAGATAATGACAAAGGACAGAGGGTA AGCCCAACAATTACACAGCATGTAATTTACAGTCTCGTAGTACTGAAGCTGGATAAAGAGCTTTTAAAGTTTGAAACATTTTCACTTGTTCAGTGAGAGC TATGTTGAGGTACAAATTATGCATCAGTTCCTGGTATCTAGGAAGAGGTCCCAATACATGTATTCTTTTACAACTTTTAACCTTGTAGGACAATGGAAGA AAAATCTGATGTTAGTAGTTGGTTCCATGTAAGAATGTTGAATGATATGATGTGGTGGTTTTTTCACTCTTTTCTAGAAGTTGAAGCCTTTCTTATTGAT GTACAAAATATGCTGAATTTCAATCTGAGCCTGCTCATTTTCTGTCAACTTGCAGTTGTTTGACCGCTATAGAGGCAGGAGAGTTCCCGTTTAACACAGC AATATATGGAAGCGTTATGTATCTGCTAGCAAGCACAACTGTATATGTAAAGAAAATACTATCGTTAGGAGACCTAACTTTGAAATCGGTTCGCAATCTG ATGGTAGAAAATGATTTTCATTTTATCATGATAGTCATTTAGTGCAAAGGAAACTGGAAAGGAAAATGATAGTCATTTTACTACTTACTATTTTGGTCCT TTTGATTCTAATGGTTAGTGGAAAATCAATGGATTTTGGGGGTTGTCTGTTCTGCTATTCTGTTTTCATTACTATTCGTGATGCTTCACTGTGGCATTTG TTCATACACATCATACGAGTACAATAATTTTTTTGTGATGTTAATGCAGCAAATGTGAAACTGCTTAATTTTTTTCTTTTCCTTTATTTAATTTCTTGAA ATATCAACTTCTTACTCTTAATTCTTCTACTGTAATCTTGAGATTGATGTTCATTGCCCTCCCATTTTTTTAGTTAACAAAATCATTTTTGC BLAST |
Tissue | pods |
Gene name | LI_gene_142648; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_282162
Blastp | Vesicle transport protein GOT1 from Arabidopsis with 69.23% of identity |
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Blastx | Vesicle transport protein GOT1 from Arabidopsis with 69.23% of identity |
Eggnog | golgi transport(COG5120) |
Kegg | Link to kegg annotations (AT3G03180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455937.1) |
Pfam | Got1/Sft2-like family (PF04178.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |