Ll_transcript_319422

• Id Trinity: TRINITY_DN46219_c2_g3_i7
• Name Transcript: Ll_transcript_319422
• Sequence: TGTTGAGTGGGGCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGT GGCCTAGTGGGTCTAGAACCCACAAGGGTTGCAGAAATCCTCAAAGATCGGCCTTTGTGGTTTCGAGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGC CCACATCTAATGGTGGAACCATTGAGCTGCTATATATGCAGCTATATGCGCCAACCACATTGGCACCTGCTCGGGACTTCTGGTTATTGCGCTACACTTC TGTTTTAGAAGATGGGAGCCTAGTGATATGTGAAAGGTCTCTTAAAAATACACAAAATGGTCCAAGCATACCTCCCGTGCCGCATTTTGTTAGAGCAGAG ATGCTGCCTAGTGGATACCTGATAAGACCTTGTGAAGGTGGTGGTTCTATCATCCACATTGTTGATCATATGGATTTGGAGCCGTGGAGTGTGCCAGAAG TGCTGCGTCCACTTTATGAATCATCAGTAATGCTGGCCCAGAAGACAACTATGGCGGCCCTACGTCAGCTAAGGCAGATTTCACATGAAGTTTCTCAGTC AAATGTCACCACTGGGTGGGGTAGACGTCCAGCGGCTCTAAGAGCACTTAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCGCTCAATGGTTTTACTGAT GAGGGATGGTCAACAATTGGCAATGATGGTGCAGATGATGTTACGATTCTAGTGAATTCATCCCCGGACAAGTTAATGGGTCTAAATCTTTCCTTTGCAA ATGGATTTCCATCTGTCAGTAACTCAGTCTTGTGTGCCAAAGCATCAATGCTATTACAGAACGTGCCCCCAGCCATTCTCCTCCGGTTCCTGCGGGAGCA TAGATCAGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCGTTAAAGTTGGCCCTTGTAGCTTTTCAGGATCTCGTGTTGCAAACTATGGG GGTCAAGTTATTCTCCCTCTAGCACATACTGTTGAACATGAAGAGTTTCTGGAGGTCATTAAATTGGAAGGAATTGCACATTCTCCTGAAGAGGCAATGA TGCCCAGAGAAGTGTTTCTTTTGCAACTATGTAGTGGAATGGATGAGAATGCTGTCGGCACCTGTGCCGAGCTTATATTTGCTCCAATTGATGCGTCCTT TGCTGATGATGCCCCTCTTCTACCTTCTGGATTTCGCATCATTCCTCTTCAATCCGGAAAGGAAGCTTCCAGCCCTAACCGTACCCTCGACCTTGCATCT GCCCTTGACATTGGCCCCACCAAAAACAAAGCTTCAAATGATTATGCCGGAAATTCTGGCTGTGTTAGATCTGTAATGACAATAGCATTTGAATTTGCAT TTGAAAGTCATATGCAAGATCATGTAGCATCAATGGCACGTCAATATGTTCGCAGCATTATATCATCAGTCCAAAGGGTGGCATTAGCACTTTCTCCTCA TTTGAGTTCGCATGCTGGCCTTAGGACACCATTAGGTACTCCCGAAGCACAAACACTTGCTCATTGGATATGCAACAGTTACAGGTGCTATATGGGTGTT GAGCTACTTAAATCCAATATCGAGGGGAACGAATCGGTGCTGAAGTCCCTGTGGCATCACTCAGATGCAATATTGTGCTGCACTCTAAAGGCAATGCCAG TGTTTACTTTCTCGAACCAGGCAGGGCTTGACATGCTCGAGACCACACTAGTTGCGCTTCAAGATATAACTTTAGAGAAAATATTCGATGATCATGGACG AAAGATTCTCTTCGCCGAGTTTCCTCAGATTATCCAACAGGGTTTTGCATGTCTTCAAGGTGGTCTTTGCCTCTCGAGCATGGGTCGACCCGTGTCGTAC GAGAGAGTTGTTGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATTTGCTTTATGTTTATGAACTGGTCTTTTGTTTGAAATTATGTTATGA GTATAGGTATTTCAAAGTGTTAAGAACTTAAGATGAAGATTTACTCCCAAAGACACTTATGCTTTGTTGGTTGGTCTATTAATGTATTTTGCTTTTGAAA TTGAGACTTGGATTTCAAGACTATATGTATTTAGTGCTTTCCTATGAAGTGTTAAACATTTGTGATGTGGGATAAATTTTTCTTGATGCATTAACATCTT TCTGAGGGAACAAAAATTAATGATCAACCTAAATTCAG
• Tissue: pods
• Gene name: LI_gene_143043;
• Additional information: details;

Expression of Ll_transcript_319422

FPKM

• PAB: 18.8
• PNAB: 24.1
• PS1: 6.2
• PS2: 9.8
• PS3: 11.6
• PW1: 33.6
• PW2: 47.8
• PW3: 32.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319422

• Blastp: Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 84.31% of identity
• Blastx: Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 84.31% of identity
• Eggnog: homeobox-leucine zipper protein(ENOG410XQ3R)
• Kegg: Link to kegg annotations (AT1G52150)
• CantataDB: -
• Mirbase: far-MIR166 (MI0016616)
• Ncbi protein: Link to NCBI protein (XP_019429328.1)
• Pfam: START domain (PF01852.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;