Ll_transcript_320328

• Id Trinity: TRINITY_DN46244_c4_g1_i1
• Name Transcript: Ll_transcript_320328
• Sequence: GGGAAAAGGAGGAGAGAGAAAACAGGCCCAATGGTAATGAATTGAGTGAGACGATTGTTGAATACGATCGGTATCGTTGAAATTGAAGCATGGCCCCACT CCCATCGCAGCCATTGTTGCTATTCACCAACGCCGCCATCTCTTAGTCTAGATCCTCCGTCCATGGTGGCCAGAGCCGTGTCTTTCAATCCCCTACACCA CTTTCCATGCGATTCATCTTCACAGTCACAGAGTGATAAACGATGAAGTTCCATACTTTTCAATCAAATCCACATTCATATTCTTCTCTGCAATGCCACC TCACAAACCTAACAAATCAAACCTCGCTCATCTCTGCATTGTTAAATCCCTTCTCAATGCCTCTTCCCGTGGCCATCTCTCTCAAGCCGTTTCTTCTCTC GACGTCTTACGCCAAAAGGGTATTCGTTTACCCTCTCACATTCTTGTCACCCTCTTGCGCCATTGCTCCGACACTCGTTCCTACCGCGACGGCAAATTGG TCCACCTCCATTTGAAGCTCACCGGTTTCAAACGCCCCACTACGCTTTTGGGTAACCATTTGATCTGTATGTACTTCAGGTGTGGCGACTATGTTAATGC ACGTAAGGTGTTTGATAAAATGGGTGTTAGAAATTTATACTCTTGGAACAATATGCTTTCTGGGTATGTTAAATTGGGGATGATTAAGCAAGCTAGGAAT TTGTTTTATAGAATGCCTGAAAGGGATTATGTATCGTGGAATACGATGGTGGTTTGTTATGCACATAGTGGCATGTTTGGTGAGGCTTTCAGATTTTATG GAGAGTTGAGGAGGTTGTCCATTGGGTATAATGAGTTTACCTTTGCCAGTGTGTTGATTGTTTGTGTTAAATTGAGAGAGTTTGACCTTTCTAGACAAAT TCATGCACGGGTTTTAGTCATTGGATTTTTGTCCAATGTGGTTGTATCCAGTTCAATTGTTGATGCTTATGCTAAGTGTGGAAAGATGGAAGATGCAAGG AGATTATTTGATGAGATGTCGGTGAGGGATATCCCTGCCTGGACGACATTAGTTTCGGGTTATGCCTCATTGGGGGACATGGCATCAGCGAATCAGCTGT TTAATCAGATGCCTCAGAAAAATTCATATTCATGGACGTGTTTGGTTAGTGGTTATGCTAGAAATGGTATGGGTCATGAAGCACTTGGAGTGTTTCAAAA GATGATCAAGCATCAAGTTAGACCTGATCAATTTACATTTAGTAGCTGCCTCCTTGCTTGTGGCAATATTGTTTCGTTGAAACATGGTAAAGAAATACAT GCGTTTTTGGTGCGAAATAACTTCCGACCTAATACTGTCGTTGTTAGTGCTATTGTTGACATGTATTCAAAATGTGGAAGCATGGAAACAGCCAAGCGGG TCTTCAATTTCATTGGAAATAAGCAAGACGTAGTGTTGTGGAATGCGATGATATCATCGCTGGCCCACTTTGGCTATAGTGTAGAAGCAATTAGGTTGCT CAATGATATGCTAAGATCCGGAGTGAAGCCAAATAGGGTCACTTTTCTTGTCATTCTAAATGCTTGTAGTCATTCAGGTCTTGTGCAGGAAGCGTTTCAG TTTTTCAAGTCCATGACTAGTGAGTATGGTGTTGTCCCAGACCAAGAACATTATGCATGCCTAATAGATCTTTTGGGTCGACCTAGATGCCTTAATGAAT CCGTGAAGGATCTGCAGATGATGGATTGTAAGCGAGGTGACCATGTTTGGAACTCTTTGCCTGGTGTATGCAGAGTGTATGGAAATCTAGAACATGGAAG AGAAGTAGCTGATTTCTCTGTTAAATTGCAGCCCGAATCCCTTGCTGCCTATGTATTACTTTCAAGTATATATGCTACACTTTTGAAAAGTGGATTAAGT GATAAAGTAAGACAGACTATAGATGAGAGGCGTGTGAGGAAAGATCCAGTAATTAGTTTGAGAAATTGATGATAAGGTTCATTCTTACACTGAATCTCTT GGATCAAAGCCTCGGAACGAAACAATATCCTCAGCTTCGGGCACTTAAGTAACCAGATGGAAGACAACGCCCTGTTACCCCTAACTTCGAGATGTGAACG TTAAAGAAGTCATTTTTCAGGTGATCATTTTTGTAGAAGGCAGGAGTATCAGTTTCTGCAACTTAGCTACAATATATATTTCTTTTTTTTCATTGATTCT GGATTCTTTAGTATACTCATAGTATTCCACAGACATCCAAAAAGATGAAAACGGAGGAAAGATAAGGGAGGTTGGTGGGAAAAACCGATTAAGATAGTTC ATTTTCTTGATAGATTTTCTGCTTGCTATTTTCCCCATTGTTTGTTTGTATTTTTCATCATCAGAATAGAACCAGAAAATTTCCCCCCCATTAAGGATCT CTCTTTTTATTCTTGGGAAGTGTATCTATTTCCATGAATGGTTCGTCAATAATAATATTACAGACGAATTTACACACAACCTCATTTATCAGTGTTTGAT TCAGCCACTTAAATTTAGACGTGC
• Tissue: pods
• Gene name: LI_gene_143177;
• Additional information: details;

Expression of Ll_transcript_320328

FPKM

• PAB: 0.1
• PNAB: 3
• PS1: 2.1
• PS2: 1.8
• PS3: 2.1
• PW1: 1.4
• PW2: 1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_320328

• Blastp: Pentatricopeptide repeat-containing protein At2g21090 from Arabidopsis with 55.76% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g21090 from Arabidopsis with 55.76% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G21090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450963.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;