Ll_transcript_366857

• Id Trinity: TRINITY_DN46376_c0_g7_i2
• Name Transcript: Ll_transcript_366857
• Sequence: CTTTTATTTCATTTTGTGGCACTATTGTTTTATCCGTTTTGGTACCCTAGGCAAAGAGGGCATTTAAGAAACCATTCTCATCACTTAACCAATACTGGAA AGAGAGATCCAGAAAGAGTGTAAGGGTGTGTTGTCTATATTATTTTAAAGAGAGAGAGATAAAAAAATATGGGAAGAGGGAGAGTTGAACTGAAGAGGAT AGAGAACAAAATCAACAGGCAAGTCACATTTGCCAAGAGAAGAAATGGGTTACTCAAGAAGGCTTATGAGCTCTCAGTCCTCTGTGATGCTGAGGTTGCC CTCATCGTCTTCTCCAACCGTGGCAAGCTCTATGAGTTTAGCAGCACCTCCTGTATGATGAAAACACTGGATAAGTACCAGAAGTACAGTTACAGTGCAT TGGAGACTAGTCCATCAATCACTGACACTCAGACGAAATATCAAGAATATGTGAGACTAAAAGCGAAGGTAGAAGTGCTCCAACGCTCACAGAGAAACCT ACTTGGCGAAGATCTTGCCCAAATGAACACAACTGATCTAGCGCAGCTTGAGAATCAACTGGAGTCAGCACTGAGAAATATTAGGTCAACGAAGACTCAA TTCATGCTTGACCAGCTTGATGATCTTTACAACCGGGAAACAGTGCTTGTTGAAACTAATAATGCGTTAAGGAGTAAGTTGGAAGAAACTAATAGCTCAC AAGTTCCTGTGCCACTATCATTGGAAGCAGAAGTGCCTAACATCCATTATACCCGTTTTCCTCCTCATTCAGAAGGCTTTTCCCACCCTTTAGGAGTTAA CCCCAACTTGCAAATTGGATACAGCCCAACGGGTACTGATGATGAAGGAAACGTTGGTGCTTCATCCTTAAATATGCATGGATTCGTATCTGGGTGGATG CTTTGATGACATTGAATGAATGTCCAATCAACACAACAGATAGTAATGATGTTTGTTGAATAAATCCTTGGTTTATTTTGTAATGCACATTATTTATCGG ACCAGGATCATCTGTCCCAAATGAATAGCAATATGACACATCAATTAAAAAAATTAAACATTCATATTTTTTTTTCTATATTCTGATTGACTTGGTACAT AGTTGGGGACA
• Tissue: pods
• Gene name: LI_gene_144219;
• Additional information: details;

Expression of Ll_transcript_366857

FPKM

• PAB: 4.6
• PNAB: 7
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 10.8
• PW2: 8.7
• PW3: 6.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366857

• Blastp: MADS-box protein EJ2 from Lycopersicon with 63.31% of identity
• Blastx: MADS-box protein EJ2 from Lycopersicon with 63.31% of identity
• Eggnog: Transcription factor(COG5068)
• Kegg: Link to kegg annotations (543884)
• CantataDB: Link to cantataDB annotations (CNT0002508)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438979.1)
• Pfam: SRF-type transcription factor (DNA-binding and dimerisation domain) (PF00319.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;