Id Trinity | TRINITY_DN46492_c3_g6_i3 |
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Name Transcript | Ll_transcript_391164 |
Sequence | GGATGTTTGTACCTTGAAAATGTTGAATTGGGTTTGGAGGTCAAAGTTGGTATCTTTCATAGCGAATGAGCTTCGATGTGCTCCCTTGGATCTGATCAGA GAACAGAGAGAGAGAATCAAAATCTAACATTGTCTTATATTAATTATATTTTTTATGGACTAAATCTTTGATAAACTAAAAAGTTAAAAAGAAAATTGAA TGTGACTGAAGACTTGCATCATCTTTGTTAGAGGTTGACTTCAAACACTCTCCAATTCTGATATAAGAGGTAATCTTATTTCTTATTTCATTTTCTTTTA TGATTTCGAAGTGTTCGATAAAATGCCCCTGTGGCTGTCTTTGCAGATATTTCATTCATGGTTTTGATAAAGACATTGTTATGCCTTCGTCGTTTCTACG GCACCAAAGTGGACCTGAGGAAGCTCCGACCCATGATTCTCGACCGAATCGAGAAACGGGCACACGCTTACCCGGTTCGCTCCATGGTCCCCGTTGCAAA GGAGGTTCTCCTCGCTAGGAATGCTCATATCAATGGCGTTTCTACCCTCCTCAACTACATTCCCATCATGGCTTGCAAGTTCTGTCCAGAAATATGTATT GGTGAGCAGGGACATTTAATTCAGACTTGCTGGGGTTACAGGCGTCGTGCAAAGAACCGGATTCATGAATGGGTCAGTGGTGGTTTGAATGATATACTTG TTCCTGTTGAAACATATCAACCGCACAACACGTTCCAACATGTTATTACACACAATCAACGGTTTGACTGTGATCGCATCTCTGCCATTGTTGCGCTATG CTTGCAAGCAGGGGCTGATCCCCATGATGAAAACCTTAATTCAAGTAGTACGAACTTAGATGCTGTCGGTAACAAAGTCAATGGAACTGAATCTTTGTCG CCCAAAGATCTTGCCTTTGTAGCAAATCAAACATTCAATGCTTGGGAGGCTCTTAGGTCTGGGGTGCAGAAGTTGTTGTTGGTTTATCCAGTAAAAGTTT GTAAATATTGTTCTGAGGTTCATGTTGGGCCATCTGGACACAAAGCTGAGCTCTGTGGCATGTTTAAGTACGAGAGTTCGAAAGGAGCTCACTTTTGGAT GAAAGCTAATGTTGATGATTTAGTACCTCCAAAGATTGTATGGAGACGGAGGCCTCAAGATCCTCCCGTGCTTGTGAATGAAATGAGAGATTTTTACGGA CGTGTTCCAGCTGTATTGGATCTATGCACAAAAGCTGGCGCCATTGTGCCTGTAAAGTATAATTGTATGATGAAAGTGCAGGGTTTGTCTACTCCTGTCA ATAATAAAATTTGGCAGGAGCATTAGAGAAACAAACTTTTGAAAGAAAATTGGTAAATTGAGTTGATGGATTGATTAGAATTTGGAGCTCAATCAAGGAC AGTTTGTGAGATAACCTGATATGTCATTACTTTCGTCGGCAATTTTTATAATTTTAGGATTGGCTGGAATATCTAATTATGGATCCATATGCCTGTTCTT CAGTTGTTTCAGAAAGAACTCTGGTGCAGTGGTGCCTATATCTCAAATCTTACAAAATATTTACTATCTGCTGAGCAGATCAACACCCCTTTCTCTATAT ATGCAGCTGGACATAATGGACCCGTGTCTCAGGTTGGAATAAAGCAATTTCATGTTCTACTTCTCCAGTCTATGGTTTCTGTTCTTTGGATTCATCTTGT TTCTTGAGGAACATAAGTCTAATGATTGCTGGAAACATGAGCAAGGCAGATACTAAATTGCTGTAAATGTTTGCAATAGGATCATCACTGCCAAAGAAAA AACTGTGTAGAACTAAAATTTCATTTTCTTTCAAATGCTTAAATTGTGAGTGAATCTGAGACAATGAATATAATGATTTGGTTATTGTTAGTTTTTTTTA TATTTATTATCGCCCAATTGTAATATAATAATCCTTGTTTTTATTGCCTAAGCCTTTAAATAGTGAATAGTGAATAGCATAGTTGGTGG BLAST |
Tissue | pods |
Gene name | LI_gene_145036; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_391164
Blastp | APO protein 4, mitochondrial from Arabidopsis with 57.33% of identity |
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Blastx | APO protein 4, mitochondrial from Arabidopsis with 57.33% of identity |
Eggnog | APO protein 4(ENOG410YFGI) |
Kegg | Link to kegg annotations (AT3G21740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457357.1) |
Pfam | APO RNA-binding (PF05634.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |