Ll_transcript_520362

• Id Trinity: TRINITY_DN46524_c0_g2_i4
• Name Transcript: Ll_transcript_520362
• Sequence: TCTTCACCTAGAAGAAAAAACTCCTCTCTCTCTCTTTCTCTCAGTCTAACTCACTATTTCCTTTGGCTGAAGAGAGAGAAAGGAAAGACAGAAAATACAG CGAAAGAAAAACAAAGGAATTGAAGAAACAATGGGAATGGAATCACCTGATGCAAAAAAGTGTGGGCTGAAGCTTCCAGCAACAATGTCTGGAACCTCAC TGCGCCTTGACACGTTTTCATGTTCATCACCACTCTCCATTTCCAACCTCTCTTCACCTTCAAAAACAAACCTTTCTTCACCTTCTTCAACATCCAAATC TTCTTCCACCTGCAGTGACCGATTCATACCTTGTAGATCATCCTCAAGGCTTTACGCCTTCGCCCTCCTCGACAAACCTTCCCCCGTTAAAGATAATAAC GGACTCGGAGGAGGAAATAGCATCAATAATGAAGCTTATTCGAGGTTGTTAAAAGCCGAGTTATTTGGTTCTGATTTCGCTTCTCCTTCTCCTTCTCATG CAGGTCATGGATCAGGATCGCCTAGTATCATGAGTCCTAGTAAGAACATACTCCGATTCAAGACAGATTCATGTGGACCCACTTCACCATTTTCTTCACC TTCCACATTAGGAGGACACCGTAATGATCTCTCTTCTGATACTTCCACTCCTCCCAAACCTCCCCGAAAAGTACCCAAAACACCCCACAAGATTCTGGAT GCTCCATCACTCCAGGATGATTTTTACTTAAATCTTGTGGACTGGTCCTCTCAGAATGTTCTCGCCGTGGGTTTGGGTACTAGTGTTTATCTCTGGAGTG CTTCTAACAGCAAGGTGACCAGGTTATGTGACTTGGGGCCTCATGATGGTGTGTGTTCTGTTCAGTGGACCAAGGAGGGTTCTTATATATCCATTGGTAC CTGTCTTGGTCAAGCTCAGATTTGGGATGGAACTCGCTGCAAGAGAGTCAGAACATTGGGTGGGCATCAGACAAGAACGGGTGTCTTGGCATGGAATTCG CGCATTTTGGCATCAGGAAGCAGGGATAGGAACATACTTCAGCATGACATGAGGGTTTCAAATGACTACATTAACCAGCTTGTGGGCCACAAGTCTGAGG TTTGTGGGTTGAAATGGTCCAGTGATGATAGGGAACTTGCATCTGGTGGAAATGATAACCAGCTATTGGTGTGGAATCAGCACTCTAAGCAACCAGCATT GAGACTTACAGAGCACACAGCTGCAGTGAAGGCCATTTCTTGGTCACCTCACCAGAGCAACCTCCTTGCATCAGGAGGTGGAACAGCAGACAGGTGCATT CGCTTCTGGAACACAACAAATGGACATCAATTGAATTATATTGACACTGGGAGCCAGGTGTGCAACCTTGCCTGGAGTAAAAATGTGAATGAGTTGGTTA GTACTCACGGTTACTCACAGAATCAGATTATGGTATGGAAATATCCATCATTGGCAAAGGTTACAACTCTCACTGGTCACAGCATGCGAGTCCTTTACCT TGCTATGTCCCCTGATGGCCAGACGATAGTTACTGGTGCAGGGGATGAGACACTACGGTTTTGGAATATCTTCCCATCAATGAAAGCACCTACCCCTGTT AAAGATACAGCACTATGGTCACTGGGACGTACCCAAATTCGATGATTCTTCAATCCCGTGGAAAAACTGAACAAGGAAGAGGAAGGAGGGAAAATTCATT ATTATTTTTTTGTAATTATTTGGTATATGGAATTATGGAGAGAAAAGTAATTGTTATGAAGTGTAAAGTCATTTAAATAAGTCAATAAATTATACAAGTC TGTTTTGATGATTCTCCAATTCAAGTCTTTTTTCTTTCTTACACATTAACAACATGGGATTGGAGCAAATTCGACAAGAGTGAAATTCAATAAGAATCCT
• Tissue: pods
• Gene name: LI_gene_145236;
• Additional information: details;

Expression of Ll_transcript_520362

FPKM

• PAB: 0.2
• PNAB: 15.2
• PS1: 13.6
• PS2: 3.3
• PS3: 7.1
• PW1: 10.6
• PW2: 1.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_520362

• Blastp: Protein FIZZY-RELATED 3 from Arabidopsis with 75.2% of identity
• Blastx: Protein FIZZY-RELATED 3 from Arabidopsis with 73.61% of identity
• Eggnog: wd repeat(COG2319)
• Kegg: Link to kegg annotations (AT5G13840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462015.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;