Ll_transcript_522512

• Id Trinity: TRINITY_DN46530_c1_g1_i3
• Name Transcript: Ll_transcript_522512
• Sequence: TATCCATGTATCTAATAACAGTGAATATCAAATGTGTACTGTGTTCAGAATCAAAGTTCTATAGTTCTGTTCTGTCTATGTTGTTCGGCTTTTAGATTGA TTCAACAAACAACACTGATACAAAATGCAGGCTTCAATTGCATGCTCTTCACTTCCACATAGAAATATAGTTCTTCCACCAACCCTTTCTCCCAAACCTA ATTCTACTTTTACTTTCTTGTCTCTAACCAAATCATCCTCTTACTTCACACCAAGATGCACATTTCAACCTCAACCATTACAAATCTCATCACCTCCATC AAAATCAGTAAGAGTTTCAAGGTCTAAAGTTACTCCACTTCTGTGCGGCATTTCGTCGAACGGGTACAGTGCAAATGAAGGTAGGAGTATTAGGGAGTGG GTTGAGGTGGTCGGTGATGCGATTTCAACTGCATTTCCGTTGTGGGTAACAATTGGGTGTGTTTTGGGGTTGATGAAACCAAATTCTTTCAATTGGGTCA CTCCACAAATGAACATGGTAGGCCTCATTATCGTTATGCTTGGTATGGGTATGACTCTCAGTCTTGAAGATCTTCGTGGGGCTCTTTCTATGCCTAAGGA AGTTCTCTCTGGCTTTTTTCTTCAATATTCGGTGATGCCATTATCTGGATATTTTATAAGCAAACTCTTAAATCTTCCACCACATTATGCAGCAGGATTA ATATTAGTTGGTTGCTGTCCAGGAGGCACAGCTAGTAATATTGTCACTTATCTTGCACGTGGAAATGTCGCACTTTCTGTGATAATGACAGCTGCAAGTA CTGTATCAGCCGTGGTCCTGACTCCTTTTCTGACAGCCAAACTTGCTGGTAAGTTTGTAGCTGTGGATGCAGCTGGCTTATTGATGTCAACATTACAAGT TGTGCTCTTACCTGTATTGGCCGGTTCAATTCTGAATCAGTATTTCCAACCTCTTGTTAAACTTGTCTCTCCATTGATGCCACCCATGGCTGTAGCAACT GTCGCAATTTTGTGCGGAAATGCAATTGCCCAGAGTTCTTCTGCCATCCTTATGTCCGGCGGACAAGTAGTTTTAGCATCATGCATTCTTCATGCTTCTG GCTTTTTCTTCGGTTACATACTTGCAAGGTTTCTCGGGATAGATGTGTCATCATCCCGAACAATATCCATCGAGGTTGGAATGCAGAACTCAGTGCTTGG GGTTGTTCTGGCTGCTCAGCACTTTGGAGATCCCCTAACTACAGTACCCTGTGCTGTTTCAAGTGTGATTCACTCAGTCTTTGGTAGTATCCTAGCAGGA ATTTGGAGACGCTCTGTGCCTGCTGAGAAGAAGAAGGACTGATATATATTGCTGGACAAGGTTGATTTATGGAGTGTAATATCTATACACTGTTAGTATA AAGATTTATGCACAGTCAGTATATCATTCACCGTTCGTTTATATTATTTTTTGTGAAGAGTCAATGTTAATTAAAAATGAATGGTGAATAATAGGCTGAC TGTATATGAAATTTTTACACTGTGAGTGCATACATTTTTCTTTCTAATGTGTATGTGCATATGATTGTTTCATTGGTGACTTGTATTAGTTTCTAGTCAC CAATTAAAATGAATTTTGTCAAAGTCCTTCATAATATTTTCAAATAACATTTTAACTTCATCCTAGCAACCAAGCAAGAGTAGCATGCCAAGCAGCATAT GAACAAATATCTTATTATATCAGCAAATAAAATGGAA
• Tissue: pods
• Gene name: LI_gene_145261;
• Additional information: details;

Expression of Ll_transcript_522512

FPKM

• PAB: 2.7
• PNAB: 13.8
• PS1: 8.9
• PS2: 7.9
• PS3: 10.4
• PW1: 10.6
• PW2: 8.5
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522512

• Blastp: Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 71.82% of identity
• Blastx: Probable sodium/metabolite cotransporter BASS1, chloroplastic from Arabidopsis with 76.52% of identity
• Eggnog: bile acid(COG0385)
• Kegg: Link to kegg annotations (AT1G78560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456961.1)
• Pfam: SBF-like CPA transporter family (DUF4137) (PF13593.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;