Ll_transcript_522486

• Id Trinity: TRINITY_DN46533_c2_g1_i13
• Name Transcript: Ll_transcript_522486
• Sequence: TGTTGACTCATGAAGTTTGGGGATAAAAAGTTCGAATGTAATAATATGGAAAAGATTTATATTCACTCGATATATCATCTATTATTTATTATATATATCT TTTTATAGAATTAATAATAAATGATGAATGATGCAATAACAATATATAAAACGTAGTTCTTATATTGAGATATAAATTCAATGGGAGAAATGAAAGACAC ACCATATAAAGTATGGAAATGGTGAGAAAGAAAAGAGAGAGACCATTAAAAATGTCATGGTGGTTTAGTTCAAGTTATCATGGTGGTATCCTACTATCCC TTCTTCTGCTATTACAGTTTTCTTATCAACTTGCAAATTGTGGCTCTATAGTAAAGTTCCTTCCTGGGTTCCAGGGTCCCCTTCCTTTTCTCCTTGAAAC TGGGTATGTAGGAGTAGGTGAAAGAGAGGAAGTGCAGGCCTTTTATTATTTCATTCAGTCAGAAAATAATCCAAAGGAAGATCCTATCTTACTTTGGCTC ACAGGTGGTCCTGGTTGCTCTGCTTTGTCTGGCCTTCTTTTTGAAATAGGTCCATTTACAGTTAAAAATGAGGAATATGATGGGAGCTTGCCTACTTTGG TCTTGAGGCCACATTCATGGACAAGTGTAGGACTACATCCACATTTTTGTTTGCAGAAATCGATATTTCAGCATCGGTTTCTTTATTTCATCACACCCTT TTAGATTTACTTTTGTTATTAATTTGTTCATCCTTTAATGGTTGTTTACTGCTGGTTGTAATAATTTTTCTTGGCAGGTAAGTAGCATTATTTTTGTAGA TTTGCCTGTTAATACAGGCTTCACATATGCCACAACAGAATCTGCAGCTCAGCGAAGCGACCGAAAACTAGTCCATCAAACTCATCAATTTCTTAGAAAG TGGCTTAATGATCATCCAGAATTTCTCTCAAATGAAGTTTACATTGGTGGTGATTCATATTCTGGTATTCCTGTTCCAGCTATTGTTCAAGAAATTTCAC AAGGAAATGAAGAAGGGGTCCAACCATGGATAAATCTCCAGGGATACTTGCTGGGAAATCCGGTAACAGAATCAAGCGATAGTAACTATAAAGCCGCCTT TGCTCATGGAATGGGACTTATTTCTGATGAACTCTACAAGTCACTGGAAAATAATTGTAGAGGAGATTACATACACGAAACTACGAGAAATGAGTTATGT TCTAGAGATCTCCAGTTATTTGATAAGCTTACTTCAAGAATTAATCCTGTCCATATTTTGGAACCAAAATGTGAGTTGGTTTCTCCTAAGCCATTTGAAG TTTCTTGGAGGAGGTCTCTAAATGAGAAACACCCTCCGAATATTACCGATACACGCCTCACATTGCCAGCCTTAAACTGTCGGTCATATCCATACGCCCT CTGCGGTTATTGGGCCGATGATGTTAATGTTCGAAACGCACTGAACGTCCGAAAGGGAACTATAGGGAAATGGCATCGATGTACCTTTGATATACCGAAC GAGCATGATATCCCTACTAGCGTTCCATATCATGTAATTCTCAGTAGAAAACGCTACCGTGCACTGATATACAGTGGCGATCATGACATGAAGGTTAATT TCGTCGGGACTCAAGCGTGGATAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCCATGGTATACAAATGGCCAAGTTGCAGGATACACAAGAAC TTACTCCAATCGGATGACATTTGCAACTGTTAAGGGTGGAGGCCATACAGCTCCAGAGTACAAGCCTGAAGAATGTTTGGCTATGTACAGTGGGTGGATA TCTAAGAGGCCTTTGTAGGAATAAGCAATAAGGTCATTTCCTAATGTGGCAAAGATTAAACCTCACATTCATTGCATAATTGTGATTTCTTGATGGTTGT GTGATTTCCTTGAGTAGAAACTAATCTAAATTTTATGTCCTGTCTTTTATAATTATGTGACTTTGATGTATGAGTTTAAAATCTACGCACGGTTAATATA AAATTTTTACACTGTCAGAGTTAATGATAATTAAGAGATGAACGATGATGATTTACTGACAGTGTAAACAACACTTACACTGTCACTATCAGTGTATACA TATTAAATTATTGATGCATTCCATTTCTTCTGATGATTTGGTTTACCAACTTCAAAA
• Tissue: pods
• Gene name: LI_gene_145295;
• Additional information: details;

Expression of Ll_transcript_522486

FPKM

• PAB: 4.8
• PNAB: 1.5
• PS1: 0.8
• PS2: 0
• PS3: 0
• PW1: 3.7
• PW2: 6.1
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522486

• Blastp: Serine carboxypeptidase-like 13 from Arabidopsis with 69% of identity
• Blastx: Serine carboxypeptidase-like 18 from Arabidopsis with 53.65% of identity
• Eggnog: carboxy-peptidase(COG2939)
• Kegg: Link to kegg annotations (AT2G22980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439670.1)
• Pfam: Serine carboxypeptidase (PF00450.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;