Id Trinity | TRINITY_DN46533_c2_g1_i14 |
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Name Transcript | Ll_transcript_522487 |
Sequence | TGTTGACTCATGAAGTTTGGGGATAAAAAGTTCGAATGTAATAATATGGAAAAGATTTATATTCACTCGATATATCATCTATTATTTATTATATATATCT TTTTATAGAATTAATAATAAATGATGAATGATGCAATAACAATATATAAAACGTAGTTCTTATATTGAGATATAAATTCAATGGGAGAAATGAAAGACAC ACCATATAAAGTATGGAAATGGTGAGAAAGAAAAGAGAGAGACCATTAAAAATGTCATGGTGGTTTAGTTCAAGTTATCATGGTGGTATCCTACTATCCC TTCTTCTGCTATTACAGTTTTCTTATCAACTTGCAAATTGTGGCTCTATAGTAAAGTTCCTTCCTGGGTTCCAGGGTCCCCTTCCTTTTCTCCTTGAAAC TGGGTATGTAGGAGTAGGTGAAAGAGAGGAAGTGCAGGCCTTTTATTATTTCATTCAGTCAGAAAATAATCCAAAGGAAGATCCTATCTTACTTTGGCTC ACAGGTGGTCCTGGTTGCTCTGCTTTGTCTGGCCTTCTTTTTGAAATAGGTCCATTTACAGTTAAAAATGAGGAATATGATGGGAGCTTGCCTACTTTGG TCTTGAGGCCACATTCATGGACAAGTGTAGGACTACATCCACATTTTTGTTTGCAGAAATCGATATTTCAGCATCGGTTTCTTTATTTCATCACACCCTT TTAGATTTACTTTTGTTATTAATTTGTTCATCCTTTAATGGTTGTTTACTGCTGGTTGTAATAATTTTTCTTGGCAGGTAAGTAGCATTATTTTTGTAGA TTTGCCTGTTAATACAGGCTTCACATATGCCACAACAGAATCTGCAGCTCAGCGAAGCGACCGAAAACTAGTCCATCAAACTCATCAATTTCTTAGAAAG TGGCTTAATGATCATCCAGAATTTCTCTCAAATGAAGTTTACATTGGTGGTGATTCATATTCTGGTATTACTGTTCCAGTTATTGTTCAAGAAATTGCAC AAGGAAATGAGGAAGGGCTCCAACCACTGATAAACCTCCAGGGATACCTTCTAGGGAATGCTTTAACAACTCGACTGGAACGAAACTACGCGATTCCCTT TGCTCACGGAATGGCACTTATTTCTGATGAACTGTATGAGTCACTGAAAAAAAATTGCGAAGGAGATTATATAGACGCCGACACCAGAAATGCGCTATGT AGAAGAGACATCAAGACCTTTGATGATACTACATCAGGACTTAATATGGCCCAAATTTTGGAACCATTATGTGAGTGGCTGTCGCCGAAACCAATAGAAG TTTCTTGGAGGAGATCTGTAACTGAGAAATTTCCTTTGAAGCTCCACAATGCCCATCTCACTTTGCCTCCCTTAAGCTGTCAAAGTTATGCATACTATCT ATGTGAATATTGGGCCAACGACAAAAATGTCCGTGATGCCTTGCACATAAGAAAGGGAAGTATAGGGAAATGGTCTCGTTGTACCTTCGAGATTCCTATG AAGATGGATATCGCTAGCAGCTTTCAATATCATGTAAATCTTAGTAGAAAAGGCTATCGTTCGCTGATATACAACGGCGATCATGACATGGGAGTTCCCT TCTCGGCGTCTCAAGCGTGGATAAGATCTTTAAACTACTCCATTGTTGATGATTGGAGGCAATGGCATACAAATGGCCAAGTTGCAGGATATACAAGAAC TTACTCCAATCTGATGACATTTGCAACTGTGAAGGGTGGAAGCCACACAGCTCCTGAATTAAAGCCAGATGAATGTTTTGCCATGTTCAAAAGATGGATA TCTAAGGGACCTTTGTAGGAATAACCAAATAATAGGGTCAACAGGGACCAAAAACTTGGCATATCCATTTCAATGTCCTTAGGTAGAGATAGAAAGATCT CATTCACCTAATCTCCTATTAAATCTGAGTTTCTTTGTCTATTATCAGTTTTGTATTAACAAGATTTTTTAAATATTCAACTGGACTTATCAATTGTGCA CATGCTTGTTTTATATATTTTGTGACATCCATTTATACTATAAAATCAA BLAST |
Tissue | pods |
Gene name | LI_gene_145295; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_522487
Blastp | Serine carboxypeptidase-like 13 from Arabidopsis with 69% of identity |
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Blastx | Serine carboxypeptidase-like 19 from Arabidopsis with 51.96% of identity |
Eggnog | carboxy-peptidase(COG2939) |
Kegg | Link to kegg annotations (AT2G22980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417959.1) |
Pfam | Serine carboxypeptidase (PF00450.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |