| Id Trinity | TRINITY_DN46533_c2_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_522477 |
| Sequence | TGTTGACTCATGAAGTTTGGGGATAAAAAGTTCGAATGTAATAATATGGAAAAGATTTATATTCACTCGATATATCATCTATTATTTATTATATATATCT TTTTATAGAATTAATAATAAATGATGAATGATGCAATAACAATATATAAAACGTAGTTCTTATATTGAGATATAAATTCAATGGGAGAAATGAAAGACAC ACCATATAAAGTATGGAAATGGTGAGAAAGAAAAGAGAGAGACCATTAAAAATGTCATGGTGGTTTAGTTCAAGTTATCATGGTGGTATCCTACTATCCC TTCTTCTGCTATTACAGTTTTCTTATCAACTTGCAAATTGTGGCTCTATAGTAAAGTTCCTTCCTGGGTTCCAGGGTCCCCTTCCTTTTCTCCTTGAAAC TGGGTATGTAGGAGTAGGTGAAAGAGAGGAAGTGCAGGCCTTTTATTATTTCATTCAGTCAGAAAATAATCCAAAGGAAGATCCTATCTTACTTTGGCTC ACAGGTGGTCCTGGTTGCTCTGCTTTGTCTGGCCTTCTTTTTGAAATAGGTCCATTTACAGTTAAAAATGAGGAATATGATGGGAGCTTGCCTACTTTGG TCTTGAGGCCACATTCATGGACAAGTGTAGGACTACATCCACATTTTTGTTTGCAGAAATCGATATTTCAGCATCGGTTTCTTTATTTCATCACACCCTT TTAGATTTACTTTTGTTATTAATTTGTTCATCCTTTAATGGTTGTTTACTGCTGGTTGTAATAATTTTTCTTGGCAGGTAAGTAGCATTATTTTTGTAGA TTTGCCTGTTAATACAGGCTTCACATATGCCACAACAGAATCTGCAGCTCAGCGAAGCGACCGAAAACTAGTCCATCAAACTCATCAATTTCTTAGAAAG TGGCTTAATGATCATCCAGAATTTCTCTCAAATGAAGTTTACATTGGTGGTGATTCATATTCTGGTATTCCTGTTCCAGCTATTGTTCAAGAAATTTCAC AAGGAAATGAAGAAGGGGTCCAACCATGGATAAATCTCCAGGGATACTTGCTGGGAAATCCGGTAACAGAATCAAGCGATAGTAACTATAAAGCCGCCTT TGCTCATGGAATGGGACTTATTTCTGATGAACTCTACAAGGTAAATTAATTATTACTCCTCAATAGCTAAAAAATTGTACTAAAGAAACAAAGGTCAAAT GCTACTGCTAATGCATCTCTATTGTTTACATGATGAACAGTCACTGGAAAATAATTGTAGAGGAGATTACATACACGAAACTACGAGAAATGAGTTATGT TCTAGAGATCTCCAGTTATTTGATAAGCTTACTTCAAGAATTAATCCTGTCCATATTTTGGAACCAAAATGTGAGTTGGTTTCTCCTAAGCCATTTGAAG TTTCTTGGAGGAGGTCTCTAAATGAGAAACACCCTCCGAATATTACCGATACACGCCTCACATTGCCAGCCTTAAACTGTCGGTCATATCCATACGCCCT CTGCGGTTATTGGGCCGATGATGTTAATGTTCGAAACGCACTGAACGTCCGAAAGGGAACTATAGGGAAATGGCATCGATGTACCTTTGATATACCGAAC GAGCATGATATCCCTACTAGCGTTCCATATCATGTAATTCTCAGTAGAAAACGCTACCGTGCACTGATATACAGTGGCGATCATGACATGAAGGTTAATT TCGTCGGGACTCAAGCGTGGATAAGATCTTTAAACTACTCCATTGTGGATGATTGGAGGCCATGGTATACAAATGGCCAAGTTGCAGGGTATTCCCCTTA CTATACTTACAAAATAACTAGGCTTGAAATATCCCAATTCTTTATGTACTTGACACTTGTTTTTTTGCTAAGTAGATACACAAGAACTTACTCCAATCGG ATGACATTTGCAACTGTTAAGGCAAGTCTCATGTCCCCTTTTCTCAATGACATTCTCACATATATTTCACCATAATTACACCGTTCCCTCGTTTAGCATA CACATCATGTACCATATAACGAGTTCATCATATAAGAAGCCTTATAATACTAATATAAAAATTGACGAACCATATGTAATCAGTACGACACACCGGGACC AGTACCGCATACCATGTAACTATGGATTTCACTTACCGAATCTATTAAACCTATAATGCATTGAATGAGAAAGTGACAATGACTACAAGTTTCTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_145295; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_522477
| Blastp | Serine carboxypeptidase-like 13 from Arabidopsis with 69% of identity |
|---|---|
| Blastx | Serine carboxypeptidase-like 18 from Arabidopsis with 42.06% of identity |
| Eggnog | carboxy-peptidase(COG2939) |
| Kegg | Link to kegg annotations (AT2G22980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439670.1) |
| Pfam | Serine carboxypeptidase (PF00450.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |