Ll_transcript_521307

• Id Trinity: TRINITY_DN46595_c2_g5_i5
• Name Transcript: Ll_transcript_521307
• Sequence: GTTTTTAATAAATTTATGAGCAATATTGACTTATTTACATTTTGATATATAAATAAGGAAAAAAGTTATAATTAGGCAAAGAAAGATGGTAGAATTTATA AAGAGGAGAGAAATGTGTAGAATTTTAGAATAAAAGGTGTTTAGAGAGGGAAGTGATGATAAACCCTAGGTAGGAAGAGAAATGGAGGAAGATTCAAGTA GTAGAAATGTGTAGAATTTTAGAATAAAAGGTGTTTAGAGAGGGAAGTGATGATAAACCCTAGGTAGGAAGAGAAATGGAGGAAGATTCAAGTAGTAGAA AGAGTGAGAGTGGAGGAGGAGGGTACGTGGCGGGTGAAGAAGCAGGAGAAGGGCTACCGTACGCACCGGAGAATTGGCCTGAAGAAGGTGACATATGGGG ATGGAGAACGGGACGGAGAGTTGCAGGTAACGGTTACTTCCAAGATCGCTATCTCTACCTTCCAAACAGACTCTGTCCTACACTTGGCTCCCGCAAGAAG AGGTTGAGTTTCGCAAGCAAGCTTTCTGTTCAACGTTACCTTACTAACAATTTCCCTAATGCTCATATTCCTTCTTTCTTCTCTTCTTTCCAATGGAAGA TTCCTCTTATCCACTCTCCCTCTTCTCATGACAGTGCGGTGCCTATAGCTGCTGTTCCTCTTCAGCAGATCGCGCAACAACAGTCAGACTCGGATATTGA TGTTGTTAAATGCAAAGCTGGGAATAAAATGTGTCACGGCCTGATACCGCAAGAAGTGGAGAAATATTCACTGGTCATGCCTTGTGATATGTGTTGTACC GAACCTGATTTTTGCCGTGATTGTAGCTGCATTCTTTGTTGCAAAACTATCAGTTCAGCCTATGGCGGCTATAGTTACATCAAGTGTCAGGTAAAGCATG GTGATGGTATATGTGCCCATGTTGCGCATATGGAATGTGCTCTTCGATCTCGCATGGCTGGCACGATTGGAAAAAGTATTGGGTTAAATGCTGAGTACTA TTGCCGACGTTGCGATGGGAGGACTGGTCTGGTTTCTCATGTTAATAAGCTTCTAGAAACATGTAAAGCCACTGATTTGGATGAGGAGATTCGGAAAAAG ATCTTGAATCTTGGTGCTTGTCTCTTGCGTGGTTCACGGAAACCTGATGTGAAGGAGCTGCTGAGTCATATTGAAATGGCAATCTCAAAGCTTAACTGTG GGACCTGGAATCAGGACAATCTTACTGCTCATTCTACAGGTTCAGAACTACAGATGTCAGTTCTTTTTGGTCTTTGGCTAGACTTTGGAAATAGAAAATG ACAGTTGATCATCTTGCACATGTCTGACCATCACAGATGTTCTAAATTCAATTGTATCAGCACCTTCGTCTTAGTGATGAATATTTTGTTATTAAACAGG CTTATCAGATCATGACAATGATGCAATGGAAGTCGAAGTCAATGGAGGCCCAACTTGTTCTAGAAATGGCTCTGAGGAATATTTACCTCAGTCATTAAAG CTCGAGGCTGAGATTGATGAAATTCTCCATGCTCTTAGAAAGTCACAAGAGTTTGAATATGACGTTGCTGAAGGAAGACTCCAAGCACATAAGACTTATC TGTGGAACTTGTATCAGCAATTGGACAGTGAAAAATCTAAATTGGCATCTCAAAACTCATCTCATTCAGATGCCTTGTCTCGTGTTGTCAGAGAAAGAGA GCAACAGATAAGACGAGAACTGATGAAACTCGAAGTTATGAAGAAGGTAGCTAATGGGTTTGGCAGGACATCTAAAGATGTTTTAAAGGAGTGCTTTGGC TTAGAAATTGCAGATTAAATTGACAAAACTTCTTAGCTTCTGGCAATTTGAATTTTTCTGCTCTTTTCATTGTATTGGCATTGAACTATATTCACTATGC CACCAACTTGTGTTTTTCTCCAACCATAATCATGTGGCATTTGACTGATTTTTATGAGACTTTGTTAATTTTCTTGGGTTAGTTTATCTGTACATCATAT TTGACACCTACACATTTATCTGTCCAGTTTTTTTTTTCAAAT
• Tissue: pods
• Gene name: LI_gene_145765;
• Additional information: details;

Expression of Ll_transcript_521307

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.1
• PS2: 0.4
• PS3: 1.1
• PW1: 0.4
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_521307

• Blastp: Protein OBERON 1 from Arabidopsis with 26.74% of identity
• Blastx: -
• Eggnog: OBERON-like protein-like(ENOG4110PA9)
• Kegg: Link to kegg annotations (AT3G07780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444560.1)
• Pfam: PHD - plant homeodomain finger protein (PF07227.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;