Ll_transcript_522207

• Id Trinity: TRINITY_DN46598_c5_g1_i1
• Name Transcript: Ll_transcript_522207
• Sequence: ATCCACAACAACACTCTCTCAGAGAATGTGTTATGAGTTGAGAACATAACATAACATAGCACAGTCTTCTAACTTCTTCACTTCACTTTCCCATTTTATT CTTCTTTACCGATTACCGTCGTTACCGGTGACGAATAGGTGTTAAATGAGTGAGATCTGAGTTGGTTAATTGAGAATGGGAAGTGTTTCGTCTGAAGATG GTTCCGACCAACAGAGTGACCGTTGCGGCAGCTACACACTCAGTGCTGACGTCAGCGAATCTGAGAGTTCCACCAGTTTCTGCGGTGCTCGCCGTTTCGA CACCGAAGGTGCCTCCTCCTCCGCCAATCTCTCCCCGCTTCCCGCCGTTGCTGGCAAAGATGTGCTTCTCTGGAATCACAACCCTAAAAAACGTGACCTA GATTTGTCAGAAGTGGAAATGATGAAGGAGAGGTTCGCGAAGCTGCTTTTAGGGGAAGATATGTCTGGTGGAGGCAAAGGAGTCTGCACTGCGCTTGCAA TCTCAAATGCAATAACAAATCTCTCTGCAACTGTGTTTGGTGAGCTATGGAGGTTAGAGCCCCTAGCAGCACCGAAAAAGGCTATGTGGCGTAGGGAAAT GGAATGGCTCTTATGCGTAAGCGATTCTATTGTGGAGCTCGTGCCAGCTGTGCAGCAGTTCCCTGGTGGTGGAACATATGAAGTTATGGCTATGCGTCCT CGCTCCGATTTGTTTATCAATTTGCCAGCTTTGAAGAAGCTTGATGGAATGCTGCTTGGTATGCTTGATGGATTTGAAGATACACAGTTTTGGTATGTTG ATAAGGGAATTATATTGGGCGATTCCAAGGATTGTGATGACTATAATGGTAGACCTTCAGTTAGGCAAGAGGAGAAATGGTGGCTTCCTTCGGCTAAGGT ACCGCCAAATGGCTTGTCTGAGATTGATCGGAAGAGGTTGCAGCAGTGCAGGGATTGCACCAACCAGATATTAAAGGCTGCCATGGCAATTAATAGTTCT GTTCTTGCAGAAATGGAAATTCCTCGTGCTTACATTGGATCCTTGCCCAAGGTAATTTTGTTCTCACTCATTTGTGCTGCAAATACAAAATATATATGTA TGAATTGTGTCTCAAATTTGGTATATTATACCGTATGAAATTGTGAACATGACACTACGAGTGGTCAGACATACATTAATTCTAATTGTGTCTCAAAACT GGAATTCAGTTACGTCTTACTATTTGTTTGTTATGAATTGTTGAAAATATAATATCATGCTTCTGAACTTAAGTGCATTTGTGATGTTTTACAACTATGA ATACAGAATGGAAAGGCTTGTCTAGGGGATATAATCTATCGATACGTAACTGCTGACCAGTTCTCACCTGAGTGTCTCCTTGATTGCCTGGATCTCTCAT CAGAGCACCACACTTTGGATGTAGCTAATAGAATTGAGGCTGCCGTGCATGTATGGCGGCTGAAGGACAGCAAGAAACATTCAAATTCAGTGAAAGCCAG ACGCTCTTGGGGTGGAAAGGTGAAGGGCCTGGTTGCTAACAATGAAAGGAACCATTTTCTTTCTCAACGAGCAGAGACCCTTCTGCAAAGCTTGAAACAC CGGTTTCCAGGGCTCCCTCAAACCGCACTAGATATGGCCAAGATACAATATAATAAGGTACATTATCTTAATCTTTAGTTTGGACTTTGGATTTAACTCA CAATCTGTTATGTCCTATGGCCACAGCTTAAAATATTTGCTAATCTAGTTAATAGGTCTGTCAAGGCAATATGGAATATTTAATGTGCAACTGAGGACTT GATTGAGAAATTCTTCCCAGCAGTAACTAGTGAGAGAAGGGGGTTTAGGTCTTGTCTACATTGACTTCACAGATAGATACATTAACATGTATGATTTCTA CCAATATTTAATGGAAACCACGGGTACAAGTAACCATGACTCTGATATTATAGTAGTGATTTATTATTATACAGTTACTGAGGACTGGCACTGGGTGAAG GGGGTTTAGGTTCAACTCAATAAGCTTTTGTGAATTTTACTTTTCCTTGCAGGATGTAGGGCAATCTATTCTTGAAAGCTATTCAAGGGTGATGGAGAGC TTGGCCTTTAACATAATAGCCAGGATTGATGATGTCCTTTATGTTGATGACACTGTAAAGCGCCGTTCAGCCGCAGAGTCTATCTCGCTCTTCAGCCGAG GTGGTTTTGGTGGTATGCCTATTCAGAAGAGAATGTCTCCAAGTCCATTCTCAATTCAACACACCCCATATGCCTCTCCCTTTGCAACCCCATCTTTCTG TTCCTCCTCTCCCATTACTGGGAGCCCATGCAGTCCTCAAATAACACCTACCGTGAAGCGGATCGGTCGAAAGGAGGCAACGGATTCTAAGCCTGAAAAG TTGGTATCCGCTGATTTGGAGAGGGTATGGTCATTCACGGGAAACCTTAGTTCAAGAACAGCTTCTGGTAATGCCCCAGAAAGAGACTAAGTTCTACAAT TTATATTACTTGCATTTCTGGCTAAAGCCTTTGATCCCACTCCTTGTATATGAGGTTTTAATTTTTGTATATTTCTAGGCAGTACAAGTAGAATTATGTT GAAAGATTATGTCAATGAATCATTCTAGAGGCCACTCTCAATATGCATTTATAATTGCATATGCTAAATATGGTTCTGGACTTTATAACTGACTCAAGAT CAGCATTAGTCTTCTCCCTTGCCCTCCTTGTTACCATGAAATTTTCAACTGAATTTAATTAGGTCAAAAGTTAGGATAATTTTCAG
• Tissue: pods
• Gene name: LI_gene_145782;
• Additional information: details;

Expression of Ll_transcript_522207

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0
• PW2: 0.8
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522207

• Blastp: Rop guanine nucleotide exchange factor 1 from Arabidopsis with 70.68% of identity
• Blastx: Rop guanine nucleotide exchange factor 1 from Arabidopsis with 70.03% of identity
• Eggnog: rop guanine nucleotide exchange factor(ENOG4110DIX)
• Kegg: Link to kegg annotations (AT4G38430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020215005.1)
• Pfam: PRONE (Plant-specific Rop nucleotide exchanger) (PF03759.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;