Ll_transcript_522210

• Id Trinity: TRINITY_DN46598_c5_g1_i4
• Name Transcript: Ll_transcript_522210
• Sequence: ATCCACAACAACACTCTCTCAGAGAATGTGTTATGAGTTGAGAACATAACATAACATAGCACAGTCTTCTAACTTCTTCACTTCACTTTCCCATTTTATT CTTCTTTACCGATTACCGTCGTTACCGGTGACGAATAGGTGTTAAATGAGTGAGATCTGAGTTGGTTAATTGAGAATGGGAAGTGTTTCGTCTGAAGATG GTTCCGACCAACAGAGTGACCGTTGCGGCAGCTACACACTCAGTGCTGACGTCAGCGAATCTGAGAGTTCCACCAGTTTCTGCGGTGCTCGCCGTTTCGA CACCGAAGGTGCCTCCTCCTCCGCCAATCTCTCCCCGCTTCCCGCCGTTGCTGGCAAAGATGTGCTTCTCTGGAATCACAACCCTAAAAAACGTGACCTA GATTTGTCAGAAGTGGAAATGATGAAGGAGAGGTTCGCGAAGCTGCTTTTAGGGGAAGATATGTCTGGTGGAGGCAAAGGAGTCTGCACTGCGCTTGCAA TCTCAAATGCAATAACAAATCTCTCTGGTTAGTTTTGTGAATTTGCATTTAAAAATAAATGTTGTGTGTGTATAGATTGTAACTTTGTGTAAGAAATTAA AAATTGCAGCAACTGTGTTTGGTGAGCTATGGAGGTTAGAGCCCCTAGCAGCACCGAAAAAGGCTATGTGGCGTAGGGAAATGGAATGGCTCTTATGCGT AAGCGATTCTATTGTGGAGCTCGTGCCAGCTGTGCAGCAGTTCCCTGGTGGTGGAACATATGAAGTTATGGCTATGCGTCCTCGCTCCGATTTGTTTATC AATTTGCCAGCTTTGAAGAAGCTTGATGGAATGCTGCTTGGTATGCTTGATGGATTTGAAGATACACAGTTTTGGTATGTTGATAAGGGAATTATATTGG GCGATTCCAAGGATTGTGATGACTATAATGGTAGACCTTCAGTTAGGCAAGAGGAGAAATGGTGGCTTCCTTCGGCTAAGGTACCGCCAAATGGCTTGTC TGAGATTGATCGGAAGAGGTTGCAGCAGTGCAGGGATTGCACCAACCAGATATTAAAGGCTGCCATGGCAATTAATAGTTCTGTTCTTGCAGAAATGGAA ATTCCTCGTGCTTACATTGGATCCTTGCCCAAGAATGGAAAGGCTTGTCTAGGGGATATAATCTATCGATACGTAACTGCTGACCAGTTCTCACCTGAGT GTCTCCTTGATTGCCTGGATCTCTCATCAGAGCACCACACTTTGGATGTAGCTAATAGAATTGAGGCTGCCGTGCATGTATGGCGGCTGAAGGACAGCAA GAAACATTCAAATTCAGTGAAAGCCAGACGCTCTTGGGGTGGAAAGGTGAAGGGCCTGGTTGCTAACAATGAAAGGAACCATTTTCTTTCTCAACGAGCA GAGACCCTTCTGCAAAGCTTGAAACACCGGTTTCCAGGGCTCCCTCAAACCGCACTAGATATGGCCAAGATACAATATAATAAGGTACATTATCTTAATC TTTAGTTTGGACTTTGGATTTAACTCACAATCTGTTATGTCCTATGGCCACAGCTTAAAATATTTGCTAATCTAGTTAATAGGTCTGTCAAGGCAATATG GAATATTTAATGTGCAACTGAGGACTTGATTGAGAAATTCTTCCCAGCAGTAACTAGTGAGAGAAGGGGGTTTAGGTCTTGTCTACATTGACTTCACAGA TAGATACATTAACATGTATGATTTCTACCAATATTTAATGGAAACCACGGGTACAAGTAACCATGACTCTGATATTATAGTAGTGATTTATTATTATACA GTTACTGAGGACTGGCACTGGGTGAAGGGGGTTTAGGTTCAACTCAATAAGCTTTTGTGAATTTTACTTTTCCTTGCAGGATGTAGGGCAATCTATTCTT GAAAGCTATTCAAGGGTGATGGAGAGCTTGGCCTTTAACATAATAGCCAGGATTGATGATGTCCTTTATGTTGATGACACTGTAAAGCGCCGTTCAGCCG CAGAGTCTATCTCGCTCTTCAGCCGAGGTGGTTTTGGTGGTATGCCTATTCAGAAGAGAATGTCTCCAAGTCCATTCTCAATTCAACACACCCCATATGC CTCTCCCTTTGCAACCCCATCTTTCTGTTCCTCCTCTCCCATTACTGGGAGCCCATGCAGTCCTCAAATAACACCTACCGTGAAGCGGATCGGTCGAAAG GAGGCAACGGATTCTAAGCCTGAAAAGTTGGTATCCGCTGATTTGGAGAGGGTATGGTCATTCACGGGAAACCTTAGTTCAAGAACAGCTTCTGGTAATG CCCCAGAAAGAGACTAAGTTCTACAATTTATATTACTTGCATTTCTGGCTAAAGCCTTTGATCCCACTCCTTGTATATGAGGTTTTAATTTTTGTATATT TCTAGGCAGTACAAGTAGAATTATGTTGAAAGATTATGTCAATGAATCATTCTAGAGGCCACTCTCAATATGCATTTATAATTGCATATGCTAAATATGG TTCTGGACTTTATAACTGACTCAAGATCAGCATTAGTCTTCTCCCTTGCCCTCCTTGTTACCATGAAATTTTCAACTGAATTTAATTAGGTCAAAAGTTA GGATAATTTTCAG
• Tissue: pods
• Gene name: LI_gene_145782;
• Additional information: details;

Expression of Ll_transcript_522210

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.5
• PS2: 0.2
• PS3: 0.1
• PW1: 0.7
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_522210

• Blastp: Rop guanine nucleotide exchange factor 1 from Arabidopsis with 74.09% of identity
• Blastx: Rop guanine nucleotide exchange factor 1 from Arabidopsis with 72.08% of identity
• Eggnog: rop guanine nucleotide exchange factor(ENOG4110DIX)
• Kegg: Link to kegg annotations (AT4G38430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413138.1)
• Pfam: PRONE (Plant-specific Rop nucleotide exchanger) (PF03759.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;