Ll_transcript_435377

• Id Trinity: TRINITY_DN46618_c0_g1_i1
• Name Transcript: Ll_transcript_435377
• Sequence: TTTCTGAGGTTAATTATTATTGAGAGATGGAACCACAGCAAGAATTGGAGTGGATGAAAGCCCAAAAGATTGCAATAAGTGTTGACCTTGTAGATGTGGC AAAAAAGCAGCTAGAGTTCCTTGCAGCTGTTGATAGGAATCGTCACCTCTACGACGGTCCTGCCCTCGAGAGGGCGATCTATAGGTACAATGCTTGTTGG CTTCCCTTGCTTGCAAAACATTCCGAGTCCCGGATTATTGAAGGGCCTTTGGTAGTTCCTCTTGACTGTGAATGGGTTTGGCACTGTCACAGGCTCAATC CGGTGAGGTACAAATCTGACTGCGAGGAACTTTATGGGAGGGTGCTTGACAACTTTGATGTTGTATCTACTGTTCAAGGAATTTGTGGCAGGCAAACCAA AGAAATCTGGACTAAACTGTATCCAAATGAGCCTTACAATGCTGATTTGATTAATCTTTCTCCAGAGGATATCTCTGAAAGGACTGCTACACTTGCAAAA TACACCAAATATGATTTGATTTCAGCTGCTAAGAGGCAGAGTCCATTCTTTTACCAGGTATCAAGACCCCACATGAAAAATAATCTGTTTATTGAGGAAG CTGTGGCCAGATATAAAGGCTTTTTGTATCTTATCAAGACAAACAAGGAAAAGGGTTTGAAACGCTTCTGTGTTCCAACATATGACATTGACCTAATCTG GCACTCTCACCAGTTACATCCAGTTTCTTACTGTAAAGACCTCAATGAAGCGCTTGGGAAAGTGTTGGAACATGATGATACAGACTCAGACAGAACTAAA GGAAAGAAACTGGATACTGGTTTTTCTGGAACCACCAAACAGTGGGAAGACACATTTGGTACAAGATATTGGAAGGCTGGGGCTATGTATAGGGGTAATG CACCATCTCCCATCACAAGTAACCCTTCTCCATATAGCATGATTTGCAAGAAGGTTGTTTCTTCTAATGAACATCCAAAAGAAATTGAGCTACCAGATCG AAAAGTTGTGGAGGTTCTCTTGGAGTTTGTTGGGGTTAAAACCTTACCAGAGGGACAAGAAGGAGGTCTCTATGTTTTATTTTCCAAATCACAGCCTGAT ACATTCTTTGATGTTAAAAGGAGACTAAGTATTTTGTCCGAGTCTGGAGTGAAACAGGTTGCATCTTTCCAGTGTGAACCTACGGGAGAGCTGCATTTTG AACTCATGTCCCATTCTTCTTCCAAGTTACCAATAATAAGATCAACTAAGACACTGGGTTCTGTTTCATTCTCTATCAAAGAATATCTTAACCCACTTTC AAAACTCAATGTTGAGAAATGGTTGGAGGTGGTGCCAAGTTCTGGTACCATGAACTCAAAGCCGATCTTGTTACGAGTGGGCATCTCATTTACTGCCCCA GTTCCTGGACCATATGCACTTGAAATGACTATCTCTCGCCCATTTTCAAAAAATACATGTTTCTTCAACCTTCCTGGTAAGCCTCAAGGTGCCAAGAGGT GGACTGATGTCACTGATGAAACTGGCACAAGATTCATTAGCCTCCAAATGAGGGACTTGAAGAACAATAAGATCACTGGGAATCCTGGAAAGGAGGTTGT TGCCCTTATGAAGTCTGGGGAAACTTATACTCTTGCCGAGTCTAAGGAAAATGGATGGTCTGTTATGGATGATCTTTGGTTGTTTCACCTTCCAAACAAA AGCACAAATGACAGTCATCTGTTTGAGCTCACAGGCCCGAAGATGGTTAAAGTTTTCTCAGGAAGAAAGCTAGACTATGAATCGAGACACTATGGGAAAC ACGGAAATGAAACAGACTTCTTAACGGCAGTAGAATTCTCCACAGAAGATCCTTATGGCAAAGCACTAGCATTACTGGACTTGAAATCAAGACTTGTCGT GGTACGTTACTTCCGTGCTACTATATTAGACATTTTATATAGACATTCATTTTATAATTAAAAATATTTTCTTTCTGCATTTTGGTCCATTCTTATAATA ATCTAGGCAAGGGAAAAGTGGATGGTGCTGCCCGGAATCATATTGGCTTTCATTGCTTCTTCCATGATGAAAAGGGAAGGGTATGAAGGCATCATTACTA AAAGTAAAGATGTGAATATGAATGAGCATGAGGAAAAGGAAAGTGAAGAGTTGAATGGAGTGGAGTTAACCTTTGAAGGGGTAACAAAAAAGATTGCTGC CTCCAGTGGAGGCTGTGGTAGTGGCTGTGGTGGTGGTTGTGGTAGTGGCTGTGGGAATGCAGTGCAAAGTGGTGGCTGTGGTTCTGGCTGTGGTGGAGGT TGTGGGAATGCAGTGCAAAGTGGTGGCTGTGGTTCTGGCTGTGGTGGAGGTTGTGGAAATATTGTAAAGAGTGGTGGCTGCAGGGGGTGTGGTACTGGTT GCGGCGGAGGCTGTGGAAATATTATAAGGAGTGGTGGCTGTGGTGGTGGCTGTGGTTCTGGTTGTGGTGGAGGCTGTGGAAATATTGTGAGGAGTGGTGG GTGTGGAGGCTGTGGTGGTGGCTGTGGTGGATGTGGAGGAGGGTGTGGAAATGGAAACATGCCGAAGAGTGGTGCGCGTGATGGTGAACTTGTTCGAGAG TGAATGTGGCATATGAGCATTTGAATGTGGAAACAAACTATTTGAATAAAGGAGCAGTACCTGCATGAGAGTGTGTTTGATGATTATGCATGTCACTATG TATGAACCAAGCCTTGTGTGTCGATCTTTGTTTCAAGAACAGAAACAAAATCAAAAAATAAAGTCTGCTTTATCATGTAATGATAAATAATCAACTAGAT ATCATGACTTACATTTAGTTACCTGCGTTTCGCTATCCTTTTCCATGTCACATGCATTTCCCAATAATTTAAGTGTCTTAAGATTAAGATATTTTCATTT GGAAGTTCTACTTGTGATGCAATGTTCACTTCTTTATTGTGGAGTTTATGGATTTGGATAGCCGAAATTGAAACCTATGCTGTTTCCCAATTTTTCCAAT GCATGCTTAAAGCCTATCGCCTATATCGTATTTACTTCCTTCGGCTGTTATTGGCAAACAGCATAGGTTGAAACAAATAATGGCAAATGATTATTTTTTC AATTGTTGACTAAGTTTGAAATTATTAGAGATTTAACAAAGTTTAATATTGG
• Tissue: pods
• Gene name: LI_gene_145959;
• Additional information: details;

Expression of Ll_transcript_435377

FPKM

• PAB: 2.5
• PNAB: 0.7
• PS1: 0.9
• PS2: 0.6
• PS3: 1
• PW1: 0.2
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435377

• Blastp: Glycine-rich domain-containing protein 1 from Arabidopsis with 57.88% of identity
• Blastx: Glycine-rich domain-containing protein 1 from Arabidopsis with 54.14% of identity
• Eggnog: Protein of unknown function (DUF1399)(ENOG4111FEQ)
• Kegg: Link to kegg annotations (AT2G22660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423773.1)
• Pfam: Glycine-rich domain-containing protein-like (PF07173.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;