| Id Trinity | TRINITY_DN46618_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_435381 |
| Sequence | TTTCTGAGGTTAATTATTATTGAGAGATGGAACCACAGCAAGAATTGGAGTGGATGAAAGCCCAAAAGATTGCAATAAGTGTTGACCTTGTAGATGTGGC AAAAAAGCAGCTAGAGTTCCTTGCAGCTGTTGATAGGAATCGTCACCTCTACGACGGTCCTGCCCTCGAGAGGGCGATCTATAGGTACAATGCTTGTTGG CTTCCCTTGCTTGCAAAACATTCCGAGTCCCGGATTATTGAAGGGCCTTTGGTAGTTCCTCTTGACTGTGAATGGGTTTGGCACTGTCACAGGCTCAATC CGGTGAGGTACAAATCTGACTGCGAGGAACTTTATGGGAGGGTGCTTGACAACTTTGATGTTGTATCTACTGTTCAAGGAATTTGTGGCAGGCAAACCAA AGAAATCTGGACTAAACTGTATCCAAATGAGCCTTACAATGCTGATTTGATTAATCTTTCTCCAGAGGATATCTCTGAAAGGACTGCTACACTTGCAAAA TACACCAAATATGATTTGATTTCAGCTGCTAAGAGGCAGAGTCCATTCTTTTACCAGGTATCAAGACCCCACATGAAAAATAATCTGTTTATTGAGGAAG CTGTGGCCAGATATAAAGGCTTTTTGTATCTTATCAAGACAAACAAGGAAAAGGGTTTGAAACGCTTCTGTGTTCCAACATATGACATTGACCTAATCTG GCACTCTCACCAGTTACATCCAGTTTCTTACTGTAAAGACCTCAATGAAGCGCTTGGGAAAGTGTTGGAACATGATGATACAGACTCAGACAGAACTAAA GGAAAGAAACTGGATACTGGTTTTTCTGGAACCACCAAACAGTGGGAAGACACATTTGGTACAAGATATTGGAAGGCTGGGGCTATGTATAGGGGTAATG CACCATCTCCCATCACAAGTAACCCTTCTCCATATAGCATGATTTGCAAGAAGGTTGTTTCTTCTAATGAACATCCAAAAGAAATTGAGCTACCAGATCG AAAAGTTGTGGAGGTTCTCTTGGAGTTTGTTGGGGTTAAAACCTTACCAGAGGGACAAGAAGGAGGTCTCTATGTTTTATTTTCCAAATCACAGCCTGAT ACATTCTTTGATGTTAAAAGGAGACTAAGTATTTTGTCCGAGTCTGGAGTGAAACAGGTTGCATCTTTCCAGTGTGAACCTACGGGAGAGCTGCATTTTG AACTCATGTCCCATTCTTCTTCCAAGTTACCAATAATAAGATCAACTAAGACACTGGGTTCTGTTTCATTCTCTATCAAAGAATATCTTAACCCACTTTC AAAACTCAATGTTGAGAAATGGTTGGAGGTGGTGCCAAGTTCTGGTACCATGAACTCAAAGCCGATCTTGTTACGAGTGGGCATCTCATTTACTGCCCCA GTTCCTGGACCATATGCACTTGAAATGACTATCTCTCGCCCATTTTCAAAAAATACATGTTTCTTCAACCTTCCTGGTAAGCCTCAAGGTGCCAAGAGGT GGACTGATGTCACTGATGAAACTGGCACAAGATTCATTAGCCTCCAAATGAGGTACAGTGTATGCACTTCATGCCAGATATTAGTTAGAAATGACAGAAT TCAGTGTCAATATGGTTTCGCTATTCCTTTTTCAATAAAACTTTTGGAATTTGTGCATAATCATGATTAGAAGTTGTGAACCAAAAATAAGATCATCAGT CCATATGTGCTCATTGAGCAATTCTAGGAAAGCTTCAAATTTATTTAGCCGTAAATATTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_145959; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_435381
| Blastp | Glycine-rich domain-containing protein 1 from Arabidopsis with 61.28% of identity |
|---|---|
| Blastx | Glycine-rich domain-containing protein 1 from Arabidopsis with 61.05% of identity |
| Eggnog | Protein of unknown function (DUF1399)(ENOG4111FEQ) |
| Kegg | Link to kegg annotations (AT2G22660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423773.1) |
| Pfam | Glycine-rich domain-containing protein-like (PF07173.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |