Ll_transcript_315537

• Id Trinity: TRINITY_DN46730_c1_g2_i6
• Name Transcript: Ll_transcript_315537
• Sequence: ATTGAATGCCCATTATATCTTTTGGCAGTACAATTGCTGCACAATGGGGTTTTATTGCTTGTATATGTACTGAAATTCTCAGAAACCAGAGTTCTATAAA TTTTTTTTATCAGAAACTAGGGTTTCTGTCCTATCTGTCATTAAATATTAAATCTTATGCAACATTGTACTCAATAAATAAACATAATTTTTCAGCATAC ACCCTTGTGCTGGAGAGTGTAATTTCTTGAATTCATATTCCTTGCAGTGTTACGAGCAGGGTAAGCTTTATGGCTGCCCCAAGTTCGAGCTTTCTTTCTC AGGTTTCCCTGCATCGTACACTATTAAATGCGAGTTCATCTCAAACATTGTTTCCTTATGGGTTTTGTTTATTTGAAATTTTTATATGATTGTAGTTAAT GAAAGAACTCCTCTTAATTTAAATTGTTTGACTCATGAATTACTCAATATAATACACTGAGTTTGTAATTTTTTATTGTTTGCGTGTGCAGGATTACTAT TCTGTCCTCGGGGTTTCAAAAAATGCTAAAAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCGGGAATTATCATCCAGATGTGAACAAATCATTAC CAATCAGATTCCTCGTCAATCTCCATTACCACATTTCAAATGACTTGACTAGTGACGTCTCAAGATTGGAGCATATGATATCTGTTATTTCTTAATATAT GCTCCAGGTGAAACATATTCTCAGAAGTGTACTTGTTGATGTAGATTGTGGGAATGCTATGCTTCTTTGGTTTCCTAAGAGGAAGGATAGTGGGTAAAGA TGATTTATCCTTGGGTAATTTTCTTAGCAATCTACCTACCATCTATCTCCCAATATTAGCAGTTTATCTTTGATTGTCATTAGAATATCTTAGAAGATCT CTTCTCATATATATATATAGGGCGTAACTCTAGTGAGAACAATTCTCATATTATCATATATATATATATATATATATATATATATAGGGAGTAACTCAAG TCACACAACCATACATGTAAGCTCAGGAACTTTAAGTGCTGTGGTTTCTGTCCTCCTTGTGGGACAATTGCATGCAAACAATAATTCTGAACTAGTTTAT CCTAGGCAAAGTACAACTTTCATAGCTTGCTGGACTCTGATTATTCATGTTGAAATGATTGAGGATGTAAGACCTTTCCAGAATGATTGGCCTCCTGAGG TTGTTTCCCATGGGCCATGGCCTTATACGAACACCTGGACAAAGGAGACTTTGGTTAGCTAAAAATGCAAATGGATTCAAACTTCATGCTAATGTCAGTT TTCCTACTTGCATGATTTTTTTATATCATCTGAGTCATTTGATAAATGTTGCTTTTTGTTGAACTATTGTGTATTCACTTGCACCACAGAGAACCTGGAG CAGAAGAGAAATTCAAGGAAATCAGCAAATGCGTACGAGGTATTATCAGATGATGAGAAATGATCCATATTTGATAGATATTGAGAGGCTGGGCTTAAAG GTTCTGAAATGAACCCTGGGGATTTCAGCAACCCTTTTGATCTGTTTGAGCAACTGTTTGACATGAATCGCGGCCCAGGCAGAGATCCTTATAATGGACC AGTTGACGGTGAAGATGAATATTACAGTCTTCTTTCGAACTTCAGGGAAGCAGTCTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGGTTAGAGAGCTGT GGAACATGCAAGTTGCAATGGTTCTGGGGCTAAACCAGGGACTACACCCACCAGATGTAGCCCTTGCGGTGGTCAAGGCCGGGTTGTCTCATCAACAAAA CTCCACTAGGTGTCTTCCAGCAGCAAATGACATGCTCTTCATGTAATGGGACTGGAGAAATCTCAACACCTTGCAATACATGTTCTGGGGATGGTCGAGG GAGCAAAACAAAGCGGATAAGTGTGAAGGTCCCACCTAGTGTGGACTCTGGTAGTCGTTTGAGGGTCCGAAATAAAGGGAATGCTGGAAGGCGAGGGTGT TCTCCCTGTGACCTCTTTGCTGTGATTGAGGTTAACCCAGCACCTGCAAGGTGACATACATTGATGCAATCTTGAGGGCTACAATCAAGGTTCCTACTGT AGACGGGAATGGTGGATTTAAAAGTTCCAAGTGGGATCCAATCGAACACAACACTTGTTATGGCTAAGAAAGGTTTTCCTCTGCTGAGTAAAAACAATTT GAGGGCTGATCAATTGGTTCGTGTGCAGGTTGAAATCCCTAAAAGACTTAGCAGTGATGAGAGAAAGCTTATTGAGGAGCTTTCTTATTTAAGCAAAGAC AAGACTGCCACCAGTAAGAGATAATACTGTGGTAACTTCTGTATCTGTCAATATATTTCTACCTTTCATGGATTATTTCTTGGTTATACACTTACTGAGG AGAATTTAGCTGCCATTTAACTCTGGATGGGTGAGAATGTGTTGGTGGCACTTGGTAGATGTGTAATATAATTTATTTGTCCTTATAAACATAGGCGGAG ATGAAGTGCAAAAGAAATTAGAGATATTTTTTCTTCTTTGTAATATGGGTGGTGAATTCTTTTTATACTTCAGGTTTGATATCTATATTTCCTTAAATTA AGAAACATTAAAAAATTTGTAGGGCTGATAATGAATCGAGCAAACTCGATATTCATTCCAAATTTGATTCGTTATTTAGCTCGGTAGATTTGGTTCATGA ACAAAATGAGTCGAACTTGATAAATGTTGGTTCTTTGTCTCACTATTATGAGTGTTGGTTATTTGTCTC
• Tissue: pods
• Gene name: LI_gene_146766;
• Additional information: -

Expression of Ll_transcript_315537

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0.6
• PS2: 0.4
• PS3: 0.3
• PW1: 0
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315537

• Blastp: -
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 58.31% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462097.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;