Ll_transcript_315541

• Id Trinity: TRINITY_DN46730_c1_g2_i8
• Name Transcript: Ll_transcript_315541
• Sequence: ATTGAATGCCCATTATATCTTTTGGCAGTACAATTGCTGCACAATGGGGTTTTATTGCTTGTATATGTACTGAAATTCTCAGAAACCAGAGTTCTATAAA TTTTTTTTATCAGAAACTAGGGTTTCTGTCCTATCTGTCATTAAATATTAAATCTTATGCAACATTGTACTCAATAAATAAACATAATTTTTCAGCATAC ACCCTTGTGCTGGAGAGTGTAATTTCTTGAATTCATATTCCTTGCAGTGTTACGAGCAGGGTAAGCTTTATGGCTGCCCCAAGTTCGAGCTTTCTTTCTC AGGATTACTATTCTGTCCTCGGGGTTTCAAAAAATGCTAAAAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCGGGAATTATCATCCAGATGTGAA CAAATCATTACCAATCAGATTCCTCGTCAATCTCCATTACCACATTTCAAATGACTTGACTAGTGACGTCTCAAGATTGGAGCATATGATATCTGTTATT TCTTAATATATGCTCCAGGTGAAACATATTCTCAGAAGTGTACTTGTTGATGTAGATTGTGGGAATGCTATGCTTCTTTGGTTTCCTAAGAGGAAGGATA GTGGGTAAAGATGATTTATCCTTGGGTAATTTTCTTAGCAATCTACCTACCATCTATCTCCCAATATTAGCAGTTTATCTTTGATTGTCATTAGAATATC TTAGAAGATCTCTTCTCATATATATATATAGGGCGTAACTCTAGTGAGAACAATTCTCATATTATCATATATATATATATATATATATATATATATAGGG AGTAACTCAAGTCACACAACCATACATGTAAGCTCAGGAACTTTAAGTGCTGTGGTTTCTGTCCTCCTTGTGGGACAATTGCATGCAAACAATAATTCTG AACTAGTTTATCCTAGGCAAAGTACAACTTTCATAGCTTGCTGGACTCTGATTATTCATGTTGAAATGATTGAGGATGTAAGACCTTTCCAGAATGATTG GCCTCCTGAGGTTGTTTCCCATGGGCCATGGCCTTATACGAACACCTGGACAAAGGAGACTTTGGTTAGCTAAAAATGCAAATGGATTCAAACTTCATGC TAATGTCAGTTTTCCTACTTGCATGATTTTTTTATATCATCTGAGTCATTTGATAAATGTTGCTTTTTGTTGAACTATTGTGTATTCACTTGCACCACAG AGAACCTGGAGCAGAAGAGAAATTCAAGGAAATCAGCAAATGCGTACGAGGTATTATCAGATGATGAGAAATGATCCATATTTGATAGATATTGAGAGGC TGGGCTTAAAGGTTCTGAAATGAACCCTGGGGATTTCAGCAACCCTTTTGATCTGTTTGAGCAACTGTTTGACATGAATCGCGGCCCAGGCAGAGATCCT TATAATGGACCAGTTGACGGTGAAGATGAATATTACAGTCTTCTTTCGAACTTCAGGGAAGCAGTCTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGGT TAGAGAGCTGTGGAACATGCAAGTTGCAATGGTTCTGGGGCTAAACCAGGGACTACACCCACCAGATGTAGCCCTTGCGGTGGTCAAGGCCGGGTTGTCT CATCAACAAAACTCCACTAGGTGTCTTCCAGCAGCAAATGACATGCTCTTCATGTAATGGGACTGGAGAAATCTCAACACCTTGCAATACATGTTCTGGG GATGGTCGAGGGAGCAAAACAAAGCGGATAAGTGTGAAGGTCCCACCTAGTGTGGACTCTGGTAGTCGTTTGAGGGTCCGAAATAAAGGGAATGCTGGAA GGCGAGGGTGTTCTCCCTGTGACCTCTTTGCTGTGATTGAGGTTAACCCAGCACCTGCAAGGTGACATACATTGATGCAATCTTGAGGGCTACAATCAAG GTTCCTACTGTAGACGGGAATGGTGGATTTAAAAGTTCCAAGTGGGATCCAATCGAACACAACACTTGTTATGGCTAAGAAAGGTTTTCCTCTGCTGAGT AAAAACAATTTGAGGGCTGATCAATTGGTTCGTGTGCAGGTTGAAATCCCTAAAAGACTTAGCAGTGATGAGAGAAAGCTTATTGAGGAGCTTTCTTATT TAAGCAAAGACAAGACTGCCACCAGTAAGAGATAATACTGTGGTAACTTCTGTATCTGTCAATATATTTCTACCTTTCATGGATTATTTCTTGGTTATAC ACTTACTGAGGAGAATTTAGCTGCCATTTAACTCTGGATGGGTGAGAATGTGTTGGTGGCACTTGGTAGATGTGTAATATAATTTATTTGTCCTTATAAA CATAGGCGGAGATGAAGTGCAAAAGAAATTAGAGATATTTTTTCTTCTTTGTAATATGGGTGGTGAATTCTTTTTATACTTCAGGTTTGATATCTATATT TCCTTAAATTAAGAAACATTAAAAAATTTGTAGGGCTGATAATGAATCGAGCAAACTCGATATTCATTCCAAATTTGATTCGTTATTTAGCTCGGTAGAT TTGGTTCATGAACAAAATGAGTCGAACTTGATAAATGTTGGTTCTTTGTCTCACTATTATGAGTGTTGGTTATTTGTCTC
• Tissue: pods
• Gene name: LI_gene_146766;
• Additional information: -

Expression of Ll_transcript_315541

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_315541

• Blastp: -
• Blastx: Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 58.31% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G22360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462097.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;