Ll_transcript_314886

Id TrinityTRINITY_DN46744_c6_g4_i3
Name TranscriptLl_transcript_314886
SequenceCTCATTGCAACCAGCTCAAAATAAATGGGTAAATCCATTATAATTATTATGGTTGATTTATGTATTTATTTATGAATTATCCTAATTAATTTATAAAGTG GGGCCTTGGAATTCTATTTTGTGAGAGGCCTATTCTACACAGATAAATAACAGCCCAATTTCAAACCTAGTACTACATTCTGTTATCGAAGGTGATTGTT GTGTTACTCAGCAAATGGAGGATTTGAAGAAGAGAAAGCTAGAAGAGCATGGCAATGGTGGTTTCGCTTCCAAGGAAGACCTTCGTTTTCTTCTTGAACC CCTTTCTAAACCTCAACTCGTTGATCTTCTCACCAAACTGTGTGTTTCATTTTCTCCACTTCTTTTCTTTGTGTTTCACTATCTGTTATTACTGTTGCAA ATTATGTCTCTCTTTTAGTTTAAATGCTAAAAAAATTTATACTTTTATGTTTTATCGTTTTCGTTTTTTAAAGGGTCTTATGCTTTTGGGAGTACTGTGA GTGATTGATTGAAAAAATGTATTTGAATGAAAATTTTAATAATTAAGTATTTGTCAGTGTTCCGTATGCTTTTTTGGAATATCTTGTGTCCCACAAAGTA TTGCAAGTGCTAACTTAAGGGACTAAGGAGTGACACATGAGATGACACTCACACTTTATGTCTCTACGAATCCAGCTAACTTGAGGGACCACACAATATA CATGTTATCTTTGAATTATTAGTATTTTTTTGTATAACCGATGTTATTTTAACGAGTGTTGCACTCTGAAATCGAGCCTTTGATCTTTGGTCTAGTACGA TACCTGGGGATCTAGTGGTCCTTACACAACTATGGAAATGACTTTGAATTGTTAGTATGTTCTGCTTGCTTGTGTGCTAGTATCCACTCATTGATAAAGG GTTATAGAAGTTTTGTTCCCACTTGTATGCTGTGTGATTGACCATGTGTGTATGTGTTTGTTTGCATGTTGAGGCATAAAGAGGGTCCCAATATCCTTCA ATTGAAGAAGAAATAAAAAGTATTGCAAGTGCTGATCCTGTCCATCGAAAGCTTTTTGTTCGTGGCTTGGCCTGGAATACCACTTCAGAAACCTTGCGTG CTGCATTTCAAGAGCATGGAGAAATCGAGGAAGGGGCTGTGATCTATGATAAAACAACATCGAAATCCCGTGGCTATGGTTTTATCACTTACAGAAATAT GGAGTCAACCCAGCTAGCATTGAAAGCATCTAACAAGTTAATTGATGGAAGATTGGCAGTCTGTAATCTAGCTTGTGAGGGCTTAAACGGAACAAGTAAT GCTTCAGATCTTGCTCTAAGGAAGCTTTATATTGGAAGCTTATCACCAGAAGTCACAAGTGAGATGCTACTTAGCTATTTTGCAAGGCATGGTGAAATAG AGGAAGGTTCAGTTGCATATGACAAGGATACAAATGAATCACGTGGTTTTGGCTTCGTTACATACAAGGTAGCGGAGGCTGCAAAGAAAGCCATTGACGA CCCAGAAAAGACTCTTGGGGTAAGCTTAACACTAGATTTTTTTTATCAATCTGGAGGTGAGCTGTGAATGTAGGACCTGATTATTTCTATGCTCACATAA TGTCTTGGAGTTGCAACAAGAAGACGGAAAAAACATTTTTAGTGAAAAAAACATCATATTGGAGGAAGTTCTTTCTTAATTAGTAATTATCTAATGGCAC ATACCACTGGTTTGATCCGTGGTCTCACCCTCAAACCCTGTTCTTATCGGAGTAGAGCAAATAATGGAAGGGGTTCCAGTTCAAACTCTAATTGATTGTA TGATTTGGATCATATAAAGGTAGCTTGTCGCTAAAGTGAGCAAGATTAAATCCACCATTCCACCCTTTATTTGATATAGTGCATCAAAGTATGATAGGAT ACTGGGTTAGATAGTGTTTGGGGTGAATAGGATGCATATCATTTGTCGGATCCAAGCCCAGAGACCTATTGTCTGGAGAGTTTACACTATTAGGTAGAAA GGGGGATTGGAGGGGAGAAGAGTGAGGGTCATGCTTCTGTCTTTGAGTTTGTTAGGCAGAGAATTGTTCTCCGAAGGAACCATAGGCTGTGGACAACAAT CTATATTGTTTCTTTACCTTTGTAAGAACTCTTCAACTTCTCTTTTAATTGAGTTCCAATACTGTATCATAATCTTAATCCACTAAGTTATTTAATGGTA GATCCACTCTTACTTGCTCTCTTAAGACAAGCTTTCCCCCGAATTATAATGCACTTACGAAAAATGGCTACCATCATTTGTTTGATTGAAGTTGACAATT CCTCAATTATGTAAATTTTATCATACCACATGATGTCTTTTGTGATATAAATTAACTTCCCTGTATTCATATATAGCCTGCAATTTCTTAAGGATTATGA ACATTGAAGCAATTACATATTGTCATTGAATGACATAGTATTTATTCTTGGTTGATTGCAGGGGAGGAATATAATTGTAAAATATGCTGATTCTAACAAG GGTAAAACTGGGCAGCAATCATTTCCTGCAGGAGTGGTTCCGATGGCACCCTTACCTATGGTCCCAGGATATGTGCAGCCTGGAAAAGCCCAAGGCGGTG CTGCCGCCCCAGTTGGTTACACTTACCCCCAAGCTGTAGCTCCATATCCTGCATCTTCTTATCCAGGCCCTCCTGTTGCACCATCTCCTTATCCAACACA AGGGCAGGTTCCGTATCGTTCAGTTTCTTCCCAAAAAGACCGACTCGGGTTCCCGCCAGCACAACCCGTGGGAATGAACAACTACCCTTATTACTATCCC AAGCAATGAATGTAGTTGAACCAAATATGGCGACTCTTGGCTTTCCAGTTCAGTTCTTATTAGCCAGACCCTAGTTCCAGCCATATCATCATCAGTTATT TATGATGCTCTGTGCTGCACCTTCCTTTTTTTTCCTATGTAGAAGAATTTTGACATTCTTATTTTATGGTAATACTAGGTCAGGAATTCCTGTGACTAGA ACAAATGTTGTATTCTTTTTCTTCTGAATATTTTAATTTTTATCTGCCCCAACTGATGGATGCATTTAAGCAAGGAATCTTAGATTTCAAATCACTTGCT ATACTTTGTAAGGATATTTGGTTTCACTTTGAGGGTGATCCAGAGGTATGAGTCCAAATCTCGGAAACAATGTGTAAATCTACTCTCCTCATACCCCAAA ACTAGATTGGTCATATCTTCTCCCAGTTAGGCTAGAGTTAACTTGATTTTCATTGGCATGATAATAAAGCCATAAGCAGTAATAACTATGCAAGACCTTG ATACCTCAAATGAGGTTGCAGATATGTAGCTGGTGTATACAAGTTAGGGAG BLAST
Tissuepods
Gene nameLI_gene_146864; 
Additional informationdetails; 

Expression of Ll_transcript_314886

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_314886
BlastpUBP1-associated protein 2C from Arabidopsis with 42.16% of identity
BlastxUBP1-associated protein 2C from Arabidopsis with 42.94% of identity
EggnogRna-binding protein(COG0724)
KeggLink to kegg annotations (AT3G15010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019440828.1)
PfamRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;