| Id Trinity | TRINITY_DN46893_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_512459 |
| Sequence | GTTTTTTAAAGGATAATTTAATTTATTTTCTTGTTGTAATTTTAATAAAAAAATTCGTAGATCATTCATTGTTTCTGCTCTGCAACAAAAAATGGTAGTT CTTCAATTGAAGAAACGAAGTGATTGAGTATCTGAGACGAAAAAGATCAAAAATTTGAAGGAATACAGAAGAAACCCTAATTTTCATTTTTTGGCGATCG ATCGATCATGTCAACAACAGAACCTCCTCCTTTCCAAGAAGCACCGCGATGTGTTGTCTGTAATTGCAGTTTCAACACCTTCAGAAGAAGGCACCACTGT CGGCGCTGTGGGAGAACATTTTGCAATGAACATTCATCGGATCAAATGGCTTTACCACAATTTGGCATTTACTCAAATGTCCGAGTATGTGCTGATTGTT TCAACAATTCACGATCTGAGAAGGGTGTACCACATGCTTCTTCAGATGGAGTAAACAGGGTGACAGATGCAATTTCTAAATTAGACATTGATGAAAAAGA TGATTCAAAAACCAAACCAAATGCAGAGAATAATCAGACTGTATCGGGAGTTAAAGAGTGCAAGTGTGGAATGCCTCTTTGCATTTGTGAAGCTATTGCC CCTTCATCTGATCCACTCCCCCAGCAGAAGAAACCTACACCTGTCGTTACAGCTCCATCAAATCCTAAAACTAAGAAGACAGATACTGTTCCAAAAAATA GAGGCTCCAGTTCAACTAGCAGGTTCAGGTACGGAATGGTTAACAGAAATATTTTTGTTGGCAAAATGTATGTTTTGAGCGAGTTCATTCCCATTAGCTT AAAGCCTGAAACCCAGAAGTTAAGGAAACACACATTTCCCACAAAAAGTTGAGGGAATTTCTGTCTAAAGATTCTGGAGTTATGCTTCGGCACTTGGTGG TTCATCGTGTTAGTTTTCTGTTCCTTCTTGTGAACAAAGGAAATGAAGTGACATTGTAGCTTCATCAGGAATTTCTGGTTTATTTTAGCGCGCAGAAATT GCTTTGAGATATGGTACATTAGTCAAGCAATTAAGATTCTCCTTATGTCTAAGTTCATAAATTGGTCATCACTAATTCATTATTTAATCTTGCTATTGAG TGCTTTATGATATCATTATTTGATAGTTAATGATGCAAAAATTTCAGTTCTACATTTAATCTTGGTAATGTAACCAGTGGTACCTCAAACAGACCCCAGA TTGATTATGAAGCTAATGGAGAGGTAAATGTTTTTTTTATTGTTTAGATTTACACAATTTATTATATTTCATTGTGCAAAAAGATCTTGCACTTTGAAAG TCATCTACTGAATTGAATGAGAAGCTCTCAGGGTTTAAGAGAAGCAATAAAAAGTGGTGATGTTGCTGCTGTGAAGAAACTTCTTAATCAGGGTGTGGAT GCAAATTACCGAGACAAGCAAGGACTTTCTTTATTGCATTTGGCGGCTGTCTTCAATCAAACTGATATAGTTTTCACTCTCATGGACTCCGGGGCAAGCC TGCAATACAAAAATGCACAAGGAGAAACACCATTAGACTGTGCTCCAGCAACCTTACAATACAAAATGCGAAAGAAGATGGAAGAAGGTGGAGCAATGGG CCAAAGCATTTGAATAATCTATTACATGTATTTGTACCTTATGCTGCAAAGAGAGAAATACTTACCAATTTCTAAAAGTTCCTTGTTAGCAGAACAGAAT TTTTCAGCTTCTATATAATGCGACAGACCCGGAGTAAAACTGAGGATTCAGACATTAATAAGATACATCTTTGCAGCTAAGCAACTTAGGCAGTATCCAA GTTGTAAACTTGTTTGGTGTATGACATAAGTGCATTTTTTAGTATGCATCTTTTTCTTTTCTCTTTTTCTCATTTGATGATGATATTACGGGGAAGAAAA ATATAAACTAAGTGACTTTGGAATGGTGACATTAGAAAATCTTATCTTTTTGTGCTTTTTCTTTCTTTTCCCCACCTTTTTTCCCTTTTCCTTGTATTGC AAGGGTTAAGTCATAACGATCTTCATCTATGTGCTGTTTTCCATCAGCCTCACCCCACCACCCATTCCTCTTTGCTGTGTTCATGGTACATGTTAAACCA ACTCATGGAAATGATGCAGTGTGCATATGTTGGATCTGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_148015; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_512459
| Blastp | Vacuolar protein sorting-associated protein 27 from Nakaseomyces/Candida clade with 42.65% of identity |
|---|---|
| Blastx | Putative ankyrin repeat protein FPV231 from Avipoxvirus with 38.81% of identity |
| Eggnog | Zinc finger, FYVE domain containing(ENOG410XNRF) |
| Kegg | Link to kegg annotations (CAGL0I05830g) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419916.1) |
| Pfam | FYVE zinc finger (PF01363.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |