| Id Trinity | TRINITY_DN46946_c6_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_312010 |
| Sequence | CAAAGACCCCCTTCTCGGGAAATACCTGATCAAAGTAAAAGAACTAATGGCCAATTTCGTTGAGGCGACCATTCAGCACGTACCAAGAGAGAACAACACC CGGGCGGACATCCTTTCCAAGCTCGCCAGCACCAAGAGCCTGGGAAATAACAGGTCAGTGGTCCAGGGAACAATTTATCAACCCAGTGTCATGACAGTTG AACAAGTGGCGATCCCAGACAATTGGACAGGGCCTTTCATCCGGTACATCCTCCATGGCAGCCTACCAGCTGACCCGAAGGACAAGCAGAGGTTCCTTAG ATGTTGTGCATGGTATACATTGATACAAGGAACCCTGTACAGGCGAGGATTCTCAACTCCCCTCCTCAAATGCCTTGGACCAGAACGGGCAGACTACGTC CTCAGAGAAATTCACGAAGGAAGCTGCGGACACCATTTGGGCGCAGCATCTCTCGCCAAAAAGGTTTTGCGCGCCGGGTATTATTGGCCAACTGTTGAAA AGGATGCGACAATTCTCACTCGAAAATGCACTCGTTGCCAACTCTTTGCCGACCTCCATAAAGCCCCACCAGAGGAATTAACGACCACTCAGTCGCCTTG GCCTTTTTGCAGATGGGGCATGGACATCTTGGGACCTTTCCCTCAAGCACCTGGGCAGCTAAAGTTCCTCATTGTCGCCATTGACTACTTCACTAAATGG ATTGAGGCGGAAGCACTGGCCACTATCACCTCAGCAAACATCCAGAAGTTCACTTGGCGGAATATAATAACCCGTTTTGGCATCCCTTCAACCATAGTCA CAGATAATGGCACGCAGTTCGCCGACCGCCGCTTTCAAGAGTTGTTATTAGGTCTCCACATCAAGACTTGGATGGACGAGATTGGGAAGGGCCATACCGG GTGACCTGCAAGATTGGGAAGGGAGCATACAAGCTTCAAGACTTGGATGGACGAGAAATCCCAAGAACTTGGAACGCCACCAATCTCCGTTTATTTTATG CTTAGACGCCAGCCCCATTCGCGGTTAGTCGTCCCCACTTGTAATCTTGTTAAATTTATATATGACAACGAGATATTATTCATATTTTGTTTTGAAGGTC TTAAATTTCACCCAAGGTGCTGGTCTTCGCCCCCTTGTCTAGTAAAGCCAACCGCCCGCGACGTGGATCCTTTCCCACTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_148485; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_312010
| Blastp | Gypsy retrotransposon integrase-like protein 1 from Homo with 29.17% of identity |
|---|---|
| Blastx | Gypsy retrotransposon integrase-like protein 1 from Homo with 29.17% of identity |
| Eggnog | Retrotransposon protein(COG2801) |
| Kegg | Link to kegg annotations (54826) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431839.1) |
| Pfam | Reverse transcriptase-like (PF13456.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |