Ll_transcript_371132

• Id Trinity: TRINITY_DN47016_c1_g2_i1
• Name Transcript: Ll_transcript_371132
• Sequence: AAGAGTTTTACCGGGCATACCGGGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGTCAAGCCCATCGGACCATGCCTGAAGCATTTCCTAA TCAAACCCTTATGATGGACGAGAGTGAAGCTGAGCCGTACACTCCAGATGCCAGCCACCTTTCAAGCACATTTCTCGAAACATATGAGCCACAAAATGAC GCTTCTACTAATTTCCCTTCCAGGAAAAGTAATAGAGATCATAGTGAAGAACCTGATTCTGCTATAAACAAGATCGGGTTGAAACAGCTCAATGATCTTC TCCTTCCTGAAGAAAAAGTAAATGTTGCAAAGTTTGCTGTAGGGCATGCTAGAAGGGAGCTCAATTTTCTTGGTACACAGGAGGAGAGTATCCGGATAAA CGACGAAAGCCATGATAGCAGGACTCAAGTCTTGTCTGAGTCTGAACGGGTGACAAAGGCTGTGACAGAAGTTATAGCCTTAAAGGGAGCCATTGCTAAA TTAGAAAGTGAAAAGGAAGCTGGCTTGCATCAGTATCAGCAGAGCTTGGAGAAATTGTCTAATCTGGAGTCAGAAGTGTCTCATGCAGTAGAGAAGTCTC AAGGGCTTGATGAGCGAGCAAGTAAAGCTGAATCCGAAGCTCAAGCGTTGAAGGAGGCTCTCACCAAATTACAAGCTGAAAGGGAAGCTAGTCTAAATCA GTATCAGAAATGCTTGGAGACAATATCTAATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAACTTAATGAACGAGCTACTAGAGCTGAA ACTGAAGCCGAGTCCCTAAAGCAGGATCTTGCTAGAGTAGAAGCTGAAAGGGATGTTGCCCTTGTTCAATATAAACAATGCTTGGAGTCATTATCAAAAC TGGAGGAGAGATCAAAAGAAGCAGAGGATAATGCAAGGAGGATTAATGAACAAGCTGATAAATCCGAGAAGGAAATTGAGGTTCTGAAGTTAAAAGTTGC TAAACTTACAGAAGAGAAGAAAGATGCAGCTCTTCATTATCAACAGTGTTTGGAGATAATTTCCATTTTGGAGCATAAACTCTCTTGTGCTGAAGAGGAT ATGCGTAGGCTAAACTCCAAGGTAGATGACGGGGCTGAAAAATTGCAAAGTTCTGAACAAAAGTGTCTTCTATTGGAAACATCAAATCAAACTCTGCAGT CTGAATTGCAGTCTTTGGCACAAAAGTTGGAGTCTCGAAGCGAAGAACTTAGTGAAAAGCAGAGGGAGCTGGGAACACTTTGGGCTTCCTTACAAGAGGA GAGATTGCGGTTCATTACGGCTGAAACTGCTTTCCAAACTCTTCAGAATTTGCACTCGCAATCTCAGGAAAACCTTAGATCTCTCGCTACTGACCTTCAT GATAAGGCAGAAATCCTGGAGAACATGGAATCCCGTAAGGATGCTTTAGAGCATGAAGTGCATAGAGTGAAGGAGGAAAACAAAATTCTAAATGAGCACA AGATTTCTTCGTCTTTGTCCATAAATAAATTGCAGGATGAGATATTAAATCTAAGGGAAATAATAGAGAAACTCGAAAAGGAGGTTGAGCTGCAAGCTGA CGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTCAAAGAGGAGCTTATTGATCTGAATAAAAGACATGAGGCTATGTTAGAGGAGGTTGGGTCAACT GGCTTAGACCCACAGTGCTTTGGCTCATCTGTGAAACAATTGCAAGATGATAACTCAAAGCTGAAGGAGACATGTGAGGCTATCAACGGTGTGAAAGCAT TACTTTTGGTGAAACTGGATATCATGGAGAAAAATTTGGAGAAAAATTCTGTTTTGGAGAATTCTCTTTCAGACTTGAATGCTGAGATGGAGAGTGTCAG AGGAAAGGTAAAGGTGTTGGAAGAAAGTTGCCAATCTCTGCTTGAGGAGAAATCATCTCTTGCTACCGATAAGGACACTTTGTTCTATCAGTTACAAGTT AAAACTGAAAAGTTGGAAAAACTCTCAGAAAAGAACAACCTTTTGGAAAATTCACTATCTGGTGTGATTGCTGAACTTGAAGGATTAAGGTTAAAGTCCA AGATCTTAGAAGATAGATGCCAGTTACTTGATGATGAGAAGTCCAGTATCATATCTGAGAAAGAAACCTTTGTTTCTCAGTTGAACATCAGTCAGAAAAC ACTGAAAGATCTTGAGAAACAATGCAATGAATTGGAACTAAAGCATTTGGAACTTAATGGAGAAAGGGAATCTGCGCTTCAAAAGGTAGAAGAACTACTG GTTTTGTTATATTCTGAGAGGGAAGAACATACCAGAGTTATGAAATTTAATGAAGATGACTTAGCTGAGAAGGACTTAAGAATTCATACTCTAAAAGAAG ATGTGAATGTCCATAAAAAGGAATACGACGATGAACTGGACAGAGCCGTACACGCTCAAACTGAAATTTTCATCTTGCAGAACTTTATGCAGGATTTGGA GGAAAATAACTTATCTCTTCTAGTTGAGCGTGAGAGACTTTTGGAGGCATCTAAAATGTCTGAGAAAATGATACTTAAATTGGAGAGTGAAAATGTTCAA AAGCAGGTTGATATGAATTCTTTGTCTGAGGAAATTAGAATACTAAGAATTGGGCTGCTTCAGGTATTGAAGACTCTTGACATTAACAATGAGCATTTGT GTGAAGATATGCTTGAAGAAGACCAGATCCTTCTGAACCATATACATAGAACTCTTCAGGAGACACAGAAGTCCTTTGTCACAATTTCCAACAAAAACCA GCAACTGGCCATTGAGAATTCAGGCCTGGTAACATTCCTTGGGCAGTTGAAACTACAGGTGGAAAATGTTTTGTCGGAAAGAGATGCCCTTCGTGAGGAG TTCAAGATCCGGTCTAATCAGTTATTGGCATTGCAAATAGAGGACCGGAAGTTATTGGAGAAGAATCAAGAGATGAAGTTGACAATAGGAAAGGGGAAAG AGAGAATGAAAGTAATGACAACTGAAATAGAGAATCTATGCAAAAAGATGTCAGACTTGGAAGAGGGTTACAAAAGCTTACAGGAACAGAGTTGCAAGGC ATCGGAAGAGACAAAGTCCTTGATGAAAAGATTTATAGATCTTGGTGAAGAGAAAAGAAACTTGGAAGAAGAAATTTGTACTGCGATCCATGCTACATTA GCTCAATCTAATATTTCTCTGATTTACCAGAACACCATCTTTGAAAAGCTACTGGAACTTAAAGAGCTAGGCGAAGATCTTGTTAAACTTCAGTTTGTAA ATAATGACCTTGAGGAGAGATTAAAAATAATGGCACTCAAATTCAAAGACGCGGAAACAAAAAATTCACATCTTAAAGAGTCATTTTTCAAGTCGAACGT TGAACTAAAGTTAGTTGAATCTGTCTATGATCAATTAAGTTCTCAAATTAGTACTGAAAAG
• Tissue: pods
• Gene name: LI_gene_149008;
• Additional information: details;

Expression of Ll_transcript_371132

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 2.2
• PS2: 1.7
• PS3: 2.1
• PW1: 1.2
• PW2: 0.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_371132

• Blastp: Protein NETWORKED 1D from Arabidopsis with 43.86% of identity
• Blastx: Protein NETWORKED 1D from Arabidopsis with 44.85% of identity
• Eggnog: NA(ENOG410XW3C)
• Kegg: Link to kegg annotations (AT1G03080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441884.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;