| Id Trinity | TRINITY_DN47037_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_370819 |
| Sequence | AAATGATCTTCATCCCACTATGTATATGGATTCACACACTTTGTTAAACTCCCAAAAGACAAGACATGATCACTATAGGCATGTTGTCATGGATTTGTCC TTTTAGGCAACAAAGCTTTTTCACTTTTCAACCCTTTCTCCTCAGTTTCGCAGTTGACCAAGAAACCTTAGGAGCATCCTAGGAGTGAAAAGAAGAAGAA GAAGAAGAAGAGATGAATGCACCAGATCGTTATGAACGTTTCGTCGTCCCTGAAGGCACCAAAAAGGTATCTTACGAGAGGGACACGAAGATAATAAACG CAGCTTCTTTCACCATTGAGAGAGAAGACCACACTATTGCCAACATCCTCCGCATGCAGCTGCATAGAGACCCCAACGTGCTATTTGCTGGATACAAGTT GCCTCACCCTCTCCAGTATAAAATTATTATCAGGGTTTGTTACCTTACCCTTTCTCTCTATATCACTTTTCATTTCATTTTAATACAACAACTCAACACT ACCTTAAGCATATTTTGTGATTTAACATGGATTGAAATGGAGGGACTAAAATCACAGTCATAAAAGATGAGGACCAATGCAATTAAGCCTTTTACTAACA AGTTATTTGGCATAGTAAGTAATACAGTGTAAATTATACAAATCACCCCATTTTTATTTGGAAACTTGGATTGCAATCGGAAATAATTGTGGTCCGATTG AACTTACTTGGATTCCCTCTGCTATGGTCCTTTGTAATCTCGAGTAAATACTCATTTCAGTCCCTCGTGTTTTTCGACCTTACCCGTTTGTCCCTCGGAA ATCGTAAAACCCAAAATGTTCCCAAAAGATTTAAATGTGAGTCAAATTAATCCTTTTGTGAACTAGAGATTATTAGTGTTATCTGTTTTGTTCTTGTTTT TGCAGATACATACCACTAGTCAATCTTCTCCAATGCAGGCATATAATCAGTCTATTAATGATCTTGACAGGGAACTTGACCATTTGAAGAATGCCTTTGA GGTATAACCCTGTCTCCTTTTCTTGTTCTGTTTACAAGTGAAACTCTTCGAAATTATCGATACTTGTTTATTCTCTTATCTTATAAAGATGTTAGATACA TTTTAAAACTTTGTATCATTTCTTGCATATAAATATAGAATCAGCCATTACCCTGGAGAGTAGTTTCAGATTTATGAAATTAGGCCATATCACATGAGTA TATGACCTTTAGGTGTTTCTCATGCTTACTTGTACTTACGGCGAAATTTGAGATTGGCCGAGGTTTAAGCATTCATAAGTCATTTTATTTCGAAGAAGAA ATCTTCGTCATTTCTTGTTTTCCGATGAGTCAGGCTCATAGGACAATGGTAATTTTCAGTATACTTTTAAGGGTAAAGTTGTAACTGCAACATAAATTAA AGGATATAAATGTAAGTGTCTTTCAATTTTTCAATGTTTTCCCTCATAACTGACATCTCCAGTAATGGAGAGAAGTCTGACACATTTCCGATAGTGTTGA AAGATGGGGAAATTCTTTTCTGAAAGCCATGTGCTTTTCTTATAGATAATTGTAGTATATGCTACTTTTGTGGTGGGAAAAGATAAATTGTTGATGGATT TGTAAGTACCCTTAGTTTTATATTCAAAATTTTGATTGCAGACGGAGATGATGAAATTTTCAAGGGACTACTGATTTTCATTAATGATTGAAATGGTGTG TGTTGGAAACATTCCAAGATATTCAGGGAACAAATCAGGCCCTCCTAAGTGGAAGTTAATTAAGATGTTTTGTGTGTTATTAGACTTGTTAAAGAATTGA TGTGTTGGACTAAGGAACTTTAAGTGTGGTGAACAACTTCAATATTAACAATGATGTATTAAATGGGTGTTCTGTAATCTTTGTTTTCTCATTATGTATT ATCATGTGTATAACAAAGGTTTTACTTGTGTAAAAGTGTAAAGTTTCGCTAAATTTCCTGGAATTAAGACTTGTTGAGAAGGATAACCATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_149176; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_370819
| Blastp | DNA-directed RNA polymerases II, IV and V subunit 11 from Arabidopsis with 61.74% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerases II, IV and V subunit 11 from Arabidopsis with 61.74% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT3G52090) |
| CantataDB | Link to cantataDB annotations (CNT0000035) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_004489205.1) |
| Pfam | RNA polymerase Rpb3/Rpb11 dimerisation domain (PF13656.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |