Ll_transcript_372542

• Id Trinity: TRINITY_DN47038_c2_g1_i9
• Name Transcript: Ll_transcript_372542
• Sequence: TTTGAGCAAATGTCAGTAAGATAGTGCACTTGTTCAATGCAAAACGAGTGAAATATTCAAAAAGTTGTGAAATGTGGAAGGGTAGAATTGTAATTGAAGT GAAGGTGATGACCAAAATAGAGTAGTTTCATAAGCACTGTCCCTCAAATAATAGAAGCCAATGAGAGATGAAAAAGTAGGACAGAAACTGAAGAGGGTTC TTTTTATTTGTTAAGTCTTTTGTTTTTGTTGCATGTCACACACTTTGACACAAGACCCTTGAATTCTGTGTTCTAATCACTTGCATAGAAAAATGAGTTT TTCTTCCAATGACAATGAGTTGGATACTGTTAAGAGGATTAAACATCTAGGGAAGAAGCTTCTCAAATCAATTTCTCATCAATTTGATAATCAGCTTCTT CAACTCCTCAATGAACTGGCGCTGGTGTTAGCAACTGTGAATCAAGCACCAACCGAGCCAATTCAAAAATCACTTGTACCTTCAATGAAGGCATTGATTT CTGATGAGCTTTTGAGGCACACAGATGAGGATGTGAAGATTTCAGTTACATGTTGCATCACTCAGATTACAAGAATTGCAGCTCCAGAAGCCCCTTACGA TGATGACCGTATGAAGGAAATTTTCAAGCTTATAGTGGCAGCTTTCGGGAAACTGTCTGATGTATCTGGCCGCTGCTATGAAAAAGTACTGACCATAATT GATAATGTTGCAAAAGTCAGATTATGCTTGGTCATGCTGGACCTTCAGTGTGATGACCTGGTTATTGAGATGTTTCAGCATTTCTTGAGAAATATAAGGT CCAACCATCCGCGCCGTGTGATTGATTGGATGGTAACCATCATGACCCTGGTCATAGCCGAAAGTGAAGAAGTTTCGTCAGATCTTCTTAGACCTCTATT AGATAGCGTAAGAAAGGAAAATCAGACCATTTCACCGAGTTCTTGGACATTGGGGGAGAAAGTAATTACCAATTGTGCGGTTAAGCTTAAGCCCTATATC ATGAAATCAATGGAGTCTTCAGATCGAGCTGTTGATGAGTATGCACAAATAGTTGCTACTATTTGCCAAAATGGATCTGAATCCCCCCAACGAAATCGTT CAAACGGTTCTGAGGACAAAGTGGAGACCAAGGGGCATGAACCAGATATTACTTGTGTGATAGATGCCGAAGCAATGGATGATACTAAGCCAGACATGAG AATTATTGGTGTGGGTGCTTCTACTAAGGATGCTGAAGTTATCAAAAAGCCTATTTCAAAAAGGAAAAAGCATTCGAATCCTACCAAGCACTCGAAAAGT ATCAACACAAAAACCAGTGCAGAAAATGGCAATTCAGAGTCTGAGCAGGAGCCAAAATCTGAAACTCGGCAGAGTACTGGACCAAGGAAGCGAGGCCGTA AGCCTAATTCTTTATTGAATGCGGAGGAAGGCTATGATAACTCTTGGATTTCTAAGGGAACAGAATCTGGAAAATCAACTCTATCCAGAAAGGCTCGTGA TAGCAGCTGTACTTTTTCACCTTCTGAAAACTCTGCTTCTAGAAAGGATAAGTTGCAATTAAAGCCTAAAACTGCAAGTGAAGCACTAGTTTCTGAGCCA AGAAGTGGGAAAATTGTAAAACCTGCTCAGTCCCGAAAGACTCAAGATATTGGCAATGTTGTTTCACCCGATGAAAGTCCTGCTTCTCACAAGGATAATG CGCTGTCACACCCTGTAGATATGAGCAAAGGTCGTAAAGCTTCAATTTCTAAACCGAAGACTGATGAAAATGCTCATGTTGCATCCCCGTTGACAAATGA TAACATTCCAGATGGAAGCCGCTCCAAAAAGAGTCGATCAAGGAAAAGAAGTAGGAAAGACAATCAAGATGATGACTCTAAATCTGTGTCAAAATTAAAT GAAGGCAATTTGAATCCTCGGCCTAAAGAGACTTCTCTGGAATCTACTGATGTTAGGATGGAAAAGGAGCCGGAAGCTGGTAAGGATGCTGAAGCTAAAC CTCAGATATCCATCAGGAGAATTAAATTTCTTTGGAAGGGTGTGAAAACTACCATGGCTCCTGAAAGTGCAGTTGCTGAGATTGAAACCAAGTCTTCTCG TGACAATAAGAGGAGGCTTAGTGCTACTCCTAAAGAAGATGTCAAGGAATCATCTGCTATTAAGGAGTTGAGTACGAAGTCTGCAAATCCTCAAGCAAGG CGGAGGAGAAGTCACACCACGGCATCTGAAACTCGTGACCTTGGTGACTCGTTGGTTGGTAGTAGGATTAAGGTCTGGTGGCCATTGGACAAAACGTTTT ATGAAGGTGTTGTCGATTCCTATGATCCTGTCAAAGGAAAGCACAAGATTCTGTATGCTGATGGTGAGATGGAAGTTTTAAACTTGAAAAGGCAGCGATG GGAGGTAATTGCTGTCGATGTTTCACCCGATGAGGAACAAGGATTTGCTCTTCACAAACTTGCAGAGGCATCAGATATAGCACAAAAAAACAAAGAAGAA CCTGACTTGGAATCCGACGAGGGTAAAGATATCAATTTCCGGTCCAGGGGTAGAACTTCTGCCAGCATTTCCAAAGGTGGATCAGCAAAATCTGCTGTCA AATCTGTGGATACTTACGCCGATAAATCTATGGTTTATCAACCTGGATTGGCTAGTGTGAAAGACACTGCTAGGAAGCCTAGGTCCAAGAGAATGAGGCC TGGTTCAGATTCTGACAACAAAAAGAACAAACCTAAAACTGATGACATCGAAAAGGAAAAGGCGCATGAGGCTTGAATTTAGCAATAGGATATTTGAAGG TTACCATTTACTAGGCCTAATGCAGTGAATGTAAGTAGTACCAACTACTAAGAGATGGTTCAGTTTATTCTCTTTTTGTTTCATATTTAATCTCTAGAAC CTAGAAAACTGGTCAAGCTTCGGCAAACCCTGTCTTAGAAGGGTTTGGTATATTATGCAGTCCAAGACTATTTACTGCACAAGTGTTTGCTTCAAACCCA TTTTTGAACATGGTTTCTGGTATATATAATGATGTCAACTATTTGCATTGAATGTGTTTGTTTCATTCCTATTTCTTGAGTGCCAAACATAGATCACTTT TGTGAAGACCAACTTAAGTTGTGTATGGAAGAGATTCAGAAGTACCTAACATTTTTCGAGAAGGATATGCTTTTTGAAAACAATTCTGG
• Tissue: pods
• Gene name: LI_gene_149191;
• Additional information: details;

Expression of Ll_transcript_372542

FPKM

• PAB: 1.3
• PNAB: 5.5
• PS1: 9.6
• PS2: 13.2
• PS3: 15.1
• PW1: 6.4
• PW2: 5.8
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_372542

• Blastp: Sister chromatid cohesion protein PDS5 homolog B-B from Xenopus with 28.65% of identity
• Blastx: Sister chromatid cohesion protein PDS5 homolog B-B from Xenopus with 28.65% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (495695)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443319.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;