Ll_transcript_373131

• Id Trinity: TRINITY_DN47050_c4_g2_i3
• Name Transcript: Ll_transcript_373131
• Sequence: TGAAAGATGAAAAAACATTACCTTATGATAAGATTTAGTTTTCCACATGCCACATTATCATTATCTGTTTGATACTTCATGCTACAGTATATATTCCTTG CACATTAACCTACAAATCCTTTTCACAAGACAAGAAGAGTGACAAACGTACATATGTTGCCTTTATGGTATAAGAGCATGTTCATTGATTGTGTTGCTCT TTGCTCTACATAAATCATACTCCAAAACAAAACAAAACAGAGGCCGACAGAAGTACAAAATGATGGATACACAACAAGTACAACACAAGTATGAATTGGA TCATAGTAATAGGAAACAAGAGTTGAAGGCTTTTGATGACACTAAAGCAGGTGTTAAAGGACTAGTTGATGCTGGTATCACTAAAATTCCTCACATATTC ATTGCATCCACTACTGAGAACTCATTCAAAACATCAACATCTACTTCCAATGAACTTCAGATCCCAGTCATAGACTTCAAACATGAAGAGTTGCAAGAAG ATGGTGTTGCAAGAAAACATATCATTGACAAGGTTAAGGTAGCATCTGAAACATGTGGATTTTTTCAAGTAGTTAACCATGGAGTCCCCAAAGAAGTGCT TGATGATATGATTGAAGGAGTTCGTAGATTTCATGAACAGACACATGATGTGAAAAAGGAATTTTATACCCGAGATGGGTCAAGGAAAGTGAGATATTTC AGTAACTTTGACCTGTATGAGTCAAAAGCAGCAAACTGGAGAGACACTATGATTTGTGGCATGGCTCCAGATCCTCCTAAGCCTGAAGAATTACCTACAA CTTGTAGGTATGTATGCTCAATCTGATCCATCATCCATAATAAGATTTCCCTAGTGATGTTAACTCACAATTTAATTCTTTTTTTAGAGGAGATAGTTCA AGTATTCAACTAATTAACTAAATCAGAAGGGGGAAATTATTTTATCAAAATAAGAAATGGAACCTTTAGGGACAATTGTTCAAATGTAGAGTCAAAATAA CATTACATGGTAGAAGTAACAAAAAAATGGATTTATTAAATATAATAGTGATTGATTGAATATGCATATAAATCTCGGGCCTGCTTGGTTGTACTTGAGT AGGACATGATATGATAAAGAACCGTAGAAGATTAGAATATAATAGGCGTGCTTGATAATGATGGTATTGATGTGGTGGTGACGATGATGTTCATGTGTGA GTATACAGGGAGGAAAATTGTATTGTCTTATTTTAATCATTTCTAACTGAACTGTTGTTTACGTAGCTTGCAACAATTCTGATTGACACGAGATAAAATT GTGCAAGCAGGCTATCAACCACACCATCCCTAGGATTAAACACTTCAGTTCTTTGTTATACTATTTCTTACAATATGATTACCACTGACAATTCTCGAAT TCTCACAATATAGCTACCCGTACCAATTCTTTATTAGAATACAGATGAAATAATAAAGTGCTAGTTGTTGCTTGATCAATTAGTAATGATTTATGAAATA CCATTAATTAACTCTACTAACTCTAGCCAATTATCAATATCTCTGAGTGAGATTTGTTAAGACATAACCTTTTAAATGATATTGCTATGCTTCTTTCTAA GCCTGAGTAGGCCGTGCATTTTACCCCTGATTTATGCTTGCTAGTTTGCAAGAATGCTCTTTCTGTACTGTTCTTGACACTCTTACAGGGAAATCATGAT TTGTTACTCAAAACATGTTAAGAGGCTCGGAGATATTCTATTGGAGTTGCTTTCGGAGGCTCTGCTGCTCAAACCCAAACATTTGGAAGAGATGGAATGT GGTAAAGGACATGTGTTGGTCTCTCATTACTACCCTGCATGCCCAGAGCCTTACAAAACTATGGGAATCACTGAACATAGTGACCCTGATTTCTTCACTA TCCTTCTTCAAGATCGTATCGGTGGCCTCCAAGTGTTTTACCAAAATCAGTGGGTTGATATCAAGCCAGTGGAGGGAGCTTTAGTCATCAATCTAGGAGA CCTAATTCAGCTTATCTCTAATGACAAATTCAAGAGTGCCAAGCACAGAGTTTTAGCAAACACTATAGGCCCAAGGATATCAGTGGCATGCTTCTTCAGC ACTTACTATTATCCATCAAATCAGGTTTATGGTCCCATAAAAGAATTGTTATCAGAAGAAAATATTCCTCTTTACAAGGAAACAACGGCAAGGGATTATG TTCTTTACTACAATTCAAAAGGGCTTGGCACACCTGCACTTGAGGATTTCAGGCTTTGAAGCAATTGTATCACTTGTATGCTTTGCTTTTTGGTTTCACC AATTTGCGCCACTATATTTAGAATTGCCACTGAAGAACTCTACTTATGGTTCATTTGTTATATGGGTAGAAAAAGGATGCAAAGTTTCTTAAATAAATTT TGAATATAACGTGACAGATAAAATTAATTCATCAACTTTTGACCCTTTGATTACCTACATTGGATCCTTAAAATTCACATGTGTACGATGTGAGAAATTT GTAATATCCTTTTAAAGTAGCTTATATTTACTATATTATGTTAAAA
• Tissue: pods
• Gene name: LI_gene_149308;
• Additional information: details;

Expression of Ll_transcript_373131

FPKM

• PAB: 0.6
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.1
• PS3: 0
• PW1: 0.8
• PW2: 1.4
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_373131

• Blastp: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 from Arabidopsis with 53.01% of identity
• Blastx: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 from Arabidopsis with 60.54% of identity
• Eggnog: 2OGFe(II) oxygenase(COG3491)
• Kegg: Link to kegg annotations (AT1G06620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426496.1)
• Pfam: non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;