| Id Trinity | TRINITY_DN47107_c7_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_309539 |
| Sequence | GGTGATGATGTGATGACAGTGTATAAAACTGATACACTATCAGTGCATACATCTTTCTCTCTCGAATGAATTAAAGTGGCAGTAGAGACTAGAGAATGAG CCATTTTCACAATTTCATGTTTATACTTCTTTTTCCTTTCTCTTTTATATTCTTAGTCTTGAAGGAAATATACGTCATCTGCCTCCTATGGATTAAGGTC TTGACTATTGAGTGTTTTTGGAAGATTTATTCCTCACAAGAATAACTTTCATTAAAAAAAATACTTTTGCTTTAATTTGATATGTTTTACCTCAACTAAA GAAAATTTGTTATTTTTTGTTGCTGAAAAGCAATTTCAGAACAACTAGAAGTTTGATCACATTTTCCCATATCATTTTGCCAAACTCACTATCATACTAA ATAAAAGTGAATCATCCAGTTATGGTTTATATCATTGGCATGAGTTGATTACTTTGCTCTATATTAAATTATTAACAATAGGTGGGTGATCCAAGCTCAG ACCATGATTGTTGGGAGAGGCCGGAGGACATGGACACAAGCAGGACAGCGTATGCTGTTGATGCACCAAATGCGGCTTCCGATGTCGCTGGTGAAACAGC CGCTGCACTAGCAGCCTCATCCATGGCATTCAGGTCATCCGACCCGGGCTATTCGGAGACATTGCTACGAAATGCTATTAACGCATTCCAATTTGCAGAT AGCTACAGGGGTGCTTACAGTGATAATGATAATGTTAAGTATGGGGCCTGCCCTTATTATTGTGATTTTGATGGCTATCAGGTAATTGACTGTGACTTTC TTTGATGATTGAAGTGCTTTTTCCTTATGGATATGTATGAAAGGGTAAGGGACTAATAGCATGAGGAGGATAACGCTTTAAGCTTTTGAATATAGCAGAA ATTATAATGATATAGACAACAATATATCCAAAGGATAAACATGTTATGTAAATTTCAAATCATGAACATGTTATGTGCAATCACCATCTAATTACATTGG CTAAAAGGGAGTAGTAGATATGATGTATTACCTAACAAAAGTAGATATCCTTTTATTCAAATTTGTGAAAAATGTTACCTGTACAACATCATCAAAGTAT ATGTCAAGGAATGTTTGCAATGTGTATATGTAATTTTTGTAATTGGATCCCTTAGTCTTTGGCGGGTAGATTATTGTTATCTTTAAACACGATAGGACGA GTTGCTATGGGGAGCTGCTTGGCTAAGAAGGGCTACTCAAGATGATAATTTCCTCAACTACATTCAAAGCAATGGCAAAACGTTGGGTGCTGATGACAAT ATCAATGAGTTTGGTTGGGACAACAAGCATGCTGGCCTTAACGTTCTTGTCTCCAAGGAAGTCTTAGAAGGAAATATAGACTCTCTTGAATCCTACAAGT CCTCAGCAGAGAGCTTCCTATGCACACTTATACCGGAAACATCAAGTGCACACATAGATTACACTCCTGGTGGACTCATATACAGGCCTGGTGGAAGCAA CTTACAACATGCAACTGTCATCGCTTTCCTTGAGTTGGTGTATGCTAATTACCTGTCTCGCACGTCACAAACCATCAATTGTGGTAATGTCTATGTTAGT GCACAAACACTTCGCCAACGTGCTAAGAAGCAAGTTGATTACATTTTGGGGGATAATCCATTGAATTTATCGTACATGGTTGGCTATGGTAACAATTATC CGCAACGCATTCATCATCGTGGCTCCTCTTTACCTTCCATCAAAGATCATCCTCAGTTTATTGCGTGCAAAGAAGGTTCAATTTACTTCAATTCCACCGA TCCTAATCCTAATGTTCTTGTAGGAGCAATTGTTGGCGGACCCGGAGAAGATGATGTTTATGAGGATGATAGAGCTGATTTTAGAAAGTCTGAGCCTACC ACATATATTAATGCACCATTTGTTGGGGTTTTAGCATACTTTGTTGCTAATCCTAATCCTTAACTAGTTACTCTGCATAAGTATGAAAATATCTGTCTTT CTTTTTCCTTTGTAAATAAAAGAATATACGAGAAATTAAGTCTCTCATCTTGAGAAACGCAAGAGGGAAGAGGCTTGCTTGTGTTTGGTTGGATATATAG GAATATTATTAGAGTCTGGAGTCACCAACGTAACTGTTTCTGAGACTTCAATTACATTACCAAAGATAGAGATCAGAAGCTTGATTACTACAACTACAAG GTGCTTATTTCTGGATTTTGTCAAGAAAAGGAGTGAGATTGTTATGCTGTGATGTTTGTTAACTATCTTATTTTGTTGTTGTGTGTTTTCAATTATACTA CATTTGTTCAAACATGCATATCTCAACACGTTGTGTGTCATCATGTAATGTATTCCGAGTAAGCGGGAAGGAGTTTTGTGAATTTTAAGTATAAAGTACT ATATTTGATTACTTAGTGTTTTATGATCTTAATTCAGTTAAAAAAAAAAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_149816; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309539
| Blastp | - |
|---|---|
| Blastx | Endoglucanase 23 from Oryza sativa with 71.48% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438196.1) |
| Pfam | - |
| Rfam | - |
| GO | - |