| Id Trinity | TRINITY_DN47110_c4_g1_i22 |
|---|---|
| Name Transcript | Ll_transcript_310782 |
| Sequence | TTGAAGTGTTGTTAAACAAAAAGAACCCACCATCTCGAACTAAACTAGTTACTTCCCTCATTCACTAAACGTGTCTTCTTTGATTTTCACTAATGTTTTA GAGAGAGTGAGAGTGAGAGAGAGAGAGTGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGACTGTGATGGCTCCAAACTTGGGTGGTAGAGTGGAAGATGG TGGCACTGGGCGAGGAACAAGACCTATCTGAACATAACCCACCTTTTCAATTTCCAAAAAGATTCATTTTTTTTCTTCCTTTCAATCTCTTATGTTCTGG GTTTGGATTTTCTTCTTTCAACATGTGATTCAGGTTTAAAAGAAATGATCTGTTAATAGGAGCTCTTCTGACTTTTGGCAATGGAAATTATGCTTCAAAT TCGACTTTGTTCTCTCAGACAGATAATCTGATATCTTTACACTTGCTGTGAATCAAGGAGCCTTAAGTATATTTTTGATTGGTTATTTGTGCTGAATGGT TAAAGCTTCTTCCAAAATTTCATCAGCTACTAAGCAATCAATCTCCTTCGATTACCAGATTTTGGCTTCGTCGTGGAGCCGGGCAAATCTCCTTTGGCAA TATAGCTTCCAAGCTCCTATTTTGGAAGAGGAAAATTTATTAACCTTCTATACTTTACTTGTGTTTGAAGATTCGGCTATATTGGGCAAATCTCCTTTGG CAAATTACTTAAATCCTTTGGTTTGGTTCCTAGCAGTGAAACTATATGAAATTAAATTTTGTCGGCTTTCTGTAACAGTTTTATCTTGCTGAAGTCATTC CACTAGGAACTTCACACTTTCATCTGGACAAATCTCCTTTGGCATCTTTTGGTTACCTTGGTTTGCTTCTTCCAGCTTCTATATCTTTTTCTTCCAGAAA ACCACAAAATAATCGTCTTATAGTTTTAGCTCCTTGATACTTCTAGTGTCGAGAAACTTATCTCAGGAATTTCTTTCTGTTGGAAGTTCCAGTCCAAATT GGGCAAATCTCCTTTGGCATTTTGGAGTCGTTCATCGATTCCTGTTATCCTATCAGACAAATCTCTTGGCATCAAATCTCTGGTTTCAGTGGTCAAGATT ATCTTTTTAAGAAACTAGCTTACTATCTGTGACAAAAGCAGTATCAATCACATACATGTTGTGTTTGTACAAAAATAGACTTGAAATCAATATCTCCATC GTGGATCGCAATATATACTGCAACTGAGGTTTAGTGCTTCAATTTACTTGAGAAGGCACCTATTGGTAGATGCTAAAATGACTGATTCCGACTCAGACAC TTTCAGTGAGAGCAGCGGTAGTGAGGATCAAGAGGATATTGATTATCTATATGGTGGGCAAGCACGGAGCATATTATCAAGTTTAGAGGAAAGCATCGGG AAGATCGACGATTTTCTCTCATTTGAGAGGACATTTGTTTATGGCGACGTGGTCTGCTCCTTGTCAGACCCATCTGGACAAATGGGCAGGGTCACAAGTG TTGATGTGTTAGTGGACTTGGAAAATGTTCAAGGAAACATATTAAAAAATGTGAACTCCAAAACACTTCTGAAGATCCGATCCATTTCAGAAGGTGATTA TGTAATTAAGGGGCCGTGGCTTGGCCAGGTTCAAAGGGTGGTGGACAAAGTGACTGTGTTGTTGGATGATGGATTGAAATGTGAGATCACTGCTTTGGGA AAAGATAAGCTTTTACCAATGACTCATCATTTTCTTGAAGACTCGCAGTATCTATACTATCCAGGGCAGAGAGTAAAGGTGAACTCTTCCACTGCTTCTA AATCAGCTACATGGCTATGTGGTACCTGGAGAGACAATAAAGATGAAGGAACAGTTTGTGCTGTGGAAGCAGGTTTGGTGTATGTTGAGTGGCTTGCCTC TGCTCTTTTAGGTTCCGATTTTAATGCGAGTTCTCCACCATCCTGGCAAGATTCTGAAAACTTGACCTTGTTGTCGTGTTTTTCACATGCAAACTGGCAG CTTAGTGACTGGTGCATGCTTCAAGTTGCAGACCAAAAGGAACATATGGAACAGGTAGATCTTTCTAATGAGCATGGTATGGCAAGAGGATACACGAGAA GAAAACTCAACTCTAACGTTGGGGAATTATTTATAATTGCAAAGAAAAAGACCAAAGTTGATATTATATGGCAAAATGGTGAACATACATTGGGATTAGA TCCGCAGAACTTAGTCCCAGTGAATGTCATTAACACACATGAATTTTGGCCTCACCAGTTTGTGCTGGAAAAAGGTGCTTCTTCTGATGATCCTCTTAAG CCTAGCAGTCAAAGATGGGGTGTTGTTCTATCCGTGGATGCAAAGGAGCATACTGTAAATGTACAATGGAAAACGGTCCCCATATCTGAGCCTGACAATT TGGCTGTAGACACAATGATGGAAACTGTGAGTGCATATGAACTTGTTGAGCACCCAGATTTTTCCTGTTGTTTTGGTGATATTGTGTTCAAGGATCAACA ACAGCTTGTCTACCTAGCCGATAAAGATAATGCAAAGCCAATGACTGACGTGAATTTGGTGGCTCCTCTGATAGATCGGGACCAAAATCAGAATAACTTC CCTGGTAACTGTTACCTGTCATGTATTGGCAATGTTACTGGTTTCAAAGATGGTGATGTTGAGGTGAAATGGGCTACTGGTTTAACAACCAAGGTATGAC ATCCAATTTTCTGTACCCAAATATTGCAGTTAATGGTACTACTGGTTATATATGGTGATGTATAACTCATGAAAATATTGCTTCCCTTATATGCATTAAT TTATATAACAGTTTAATACATAATGATTTATCCTATTAGCCTAGTTATTCCCTATTCTCATGGAAATGTTATTTGTAACTGTGTTTGACTGTGTGTCTGT GAGGTATAAGATCTTTCCAAGCTGAAGCTAGGGTTGGGTTGTAGCTTCTATTTTATGTAATTAAGGTTGTTGGTTTAGGCTTATCCTTTCCACTCTTCTG TGCTACAGTAGACAAATGCTTCTACCCGCAATCAAAATCTTGATACGGTAGCAATTGGCAAATGACATACATGTTACAACCACTGACCTTATACTGCATC CTATTTAATTGATGATGCTACTGAGCATAGATTGCGCCAATATTAATCACTTAAGAACAATATTTTCTTATGTTCTAATGTATTTTACATGTTACTTCTT TAGCCTTTCATATAGAGGAAGTCTTACGGAAGTATTCCCCCCCCCGACAGGTTGCACCATATGAAATTTTTCGGATTGATAAACATGAAGGTTCAATTGT AACCCCTAATCCTTATGAAGCAAATCTTGAGGAGTTGCCTCAAGAGATGAATGAACATGGAAGTCCACCTTCTAACCCGAAGGGAAAGGGCTTGTTAAAT TATGACGGTGGCAGAGGGAATTGCGAAAAGCATTCTGGAGAGTCTAGCTCCTTTTCCCTTCCTCAAGCCGCCTTTGAATTTTTCTCTAGCATTAAAACCA GCATATTCCAAACACTTGGTGTAACATCACTTTGCAGAGCAGTTTCCTCAGTCCCAACATTTGAAGAGGGAAATGGATCTGATTTTCGTGGTAAGGAAGT TTTGAACACTTGTGACCCCTGCACTGAATCACATTCAATGAGTGGGTTGCAATCTACCGAAGACAGAACTCCATATGATGAAGTTACTGTGACTCGAGAG AGGAATGATTTTCCAGTTTCTATAGACCGCAACAGTCCAGATCGGCTGATGCAGTTTGATATAATAGATAATTGCTCAGACCACCACTTTTTTGATGAGG GAAAAGGATTAGCATCATCTCAGGTAAAAAGTGGTTGGGCGAAAAAAGTTCAGCAAGAATGGAGCATCCTAGAGAATAATCTTCCTGAAAGTATATATGT CCGTGTTTTTGAAGAAAGGATGGATCTCATGCGAGCAGCCATTGTTGGTGCCTCCGGGACCCCTTATCATGATGGGTTGTTTTTCTTCGATATATGTTTT CCTCCAGAGTATCCCAGTGAACCACCTATGGTGCACTTCAATTCTGGTGGGCTACGATTAAATCCTAATTTGTACGAGTCGGGGAAAGTCTGTCTGAGTC TGCTAAATACATGGACTGGCACATCCACTGAAGTGTGGAATCCTGGAGCCTCCACAATTCTTCAAGTCCTTCTCTCTCTGCAGGCCCTTGTCCTTAATGA TAAGCCTTATTTCAATGAGGCTGGGTATGATCAACAAATCGGAAGAGCTGAAGGAGAAAGAAACTCAGTGAGCTACAATGAGAATGCATTCCTTGTCACC TGCAAATCGATGTTGTATCTGTTAAGAAAGCCACCCAAGGTAAATTGACTAATACTCTTTGACTTTGGTCTATTATTATTACTCTGGACTTGGTTATGAC CACGGAAGCATAAAATATAATTCATGGTGGCATGTTGTTTTGGACATTTATTTATGCATACCATGCTCGAAAAATGTGTCTCGGAACAGAATAATAAACT ACAAAATAACCTGGGTAACTTGCATATTTGAATGAATTCTATGAATTATCTCAGAAAAGGAGAGGTTCATGTGGATGATAAAATGGTTAAAGATGTAAAG AAGTCATTGAGTTTCTCCATCTTTGGCCTGTACACATCTTTGAAAAGTGTGCATGATCGTCGTTTTCCTCCTTTTCATACTTTCTAGCATGATTTTGAGT TTCTTCAGGTTCGGTTTTCATTGTTGAAGTATGAGGTCATGTTCATAAGTTACTTTAAACAAAATGGTGCTATCTAAAATCTTTGAATATAGTTATAACA TGGGTGGAATTGTAACTGACAATATTGCTGCCGGTTGCAGCATTTCGAGACAGTGGTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_149843; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310782
| Blastp | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 48.28% of identity |
|---|---|
| Blastx | Probable ubiquitin-conjugating enzyme E2 24 from Arabidopsis with 48.39% of identity |
| Eggnog | ubiquitin-conjugating enzyme(ENOG410XQ7W) |
| Kegg | Link to kegg annotations (AT2G33770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425570.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |