Ll_transcript_308906

• Id Trinity: TRINITY_DN47124_c5_g4_i1
• Name Transcript: Ll_transcript_308906
• Sequence: AAAAAAACAGTGCACACGAGAGGAACAGTCGTGGAAGGAAACAATTAATGCACAAGTTTCACGATTCATAGACTGCATTTTTTTAGGTAAAAAAAGACAC TTTCTTCTGTTGAATGGTCAGAGCTATTCTGCTACCACTGAATTTTCTATAAGAGGATCACACCACAACAACACTAGTGCATTGAATCATCACCCACCAA ATCACTCTATTTTATATATTCCTCTAAAAAAATTTCATTGAGTCTATCAAACTAAACTCAAAATGGCATCAACAACTCTATCTTCTTCTTTTCTCCAATT AGATTTCCCATTAACAAAAAAACCATCTTCCAACTTAAACCGTCTTTCATTCATTCCCTCACAAATCAAAGTAAAAGTTAAAGCCTCTGTTTCTGAGAAA CCATTTCTACCAATTTCAGAACCAAGACAACTCACTAAACTTCCCATCACAAAAATCCCTGGAGATTACGGGATCCCAATTATTACTCCGTTCCAGAATC GTCTCGATTATTTCTACAACCAAGGTCGCGATGAATACTTCAAATCCAGAATCAGAAAATACAAGTCAACGGTTTTTCGCACCAACGTGCCACCTGGCCC TCCAATCGCTCCTAACCCAAACGTCGTCGTTTTACTCGACTCCAAATCCTTCCCCGTTCTCTTCGATGTTACAAAGGTTGAAAAAAGAGATGTGTTCACC GGAACTTTTATGCCTTCAACCGATTTAACCGGTGGCTATAGGGTCCTCTCTTACCTTGATCCCTCCGAACCCAAACACGGTCTCCTTAAACGACTCATCT TCTTTCAATTGAAATCACGTCGTGAACACGTGATCCCAGAGTTTAGGTCCAGTTATGATGAACTTTTTCAGACTTTGGAAAGTGAGCTTGCATCTAAAGG GAAATCTAGTTTTAATGATGCTAATGATCAAGCCGGGTTTAACTTTTTAGCTCGCTCGCTTTTCGGTTCAAATCCTGGAGACAGCTCTTTGGGCCGAGAT GGTCCTAAGATAGTTCAAAAATGGGTTTTGTTTCAGCTCAGTCCTATTTTAAAACTTGGTCTTCCCAAGTTTCTAGAAGATACCATAATCCACAATTTTC GTCTCCCTCCAAGTTTGATTAAAAAAGAGTATCAGAGGCTCTACGATTTTTTCTACCAATCTTCAGGTTTCGTTCTCGATGAAGCGCAGCGGTTAGGGAT TTCAAGAGAAGAAGCTTGTCACAATCTTTTGTTCGCTACTTGTTTCAACTCTTTTGGTGGAATGAAGTTGTTTTTCCCAAACTTGATGAAATGGATCGGG AGAGGAGGTATGAAGCTTCACACACAGCTTGCAATGGAGATTAGATCTGCCGTGAGATCCGCCGGAGGGGTGGTTACAATGGCGGCGATGGAGAACATGC CGCTGATGAAATCAGTGGTTTACGAAGCGTTCAGAATTGATCCTCCGGTACCGTTGCAGTTTGGAAAAGCGAAGAGGAATTTAATTATAGAGAGCCATGA ACATGCTTATGAAGTAAAAGAAGGGGAAATGTTATTTGGGTATCAACCTTTTGCGACGAAGGATCCTAAGGTTTTTGATAGGGCTGAGGAATTTGTTGGG GACAGGTTCGTTGGTGAAGGAGAAAAGTTGTTGAAACATGTGGTTTGGTCGAATGGACCTGAGACAGAGAATTCTAGTGTTGGGAACAAGCAATGTGCAG GGAAGGATTTTGTGATGTTGTTTTCGAGGCTCTTAGTGGTTGAGTTGTTCATGCGTTATGATTCTTTTGAGATTCAAGTTGGAACTTCTCCATTAGGTCC TTCCATTACTATCACCTCTCTAAAGAGATCAAGCTTTTAGTTTCTTATTTTAATTTTTGGGGTTTATTTAACTATCTATGTGTAAAAGGGAAACGCGTGT ATGTACGAAATTAGAATGGCGATTTGGACTGAATCTTTGAGTGGTCTATAGTGGGTTCTTGGTGGCTCACCATGCATTCTAGTCAAAGTGGTGGTGTCAT TTGTCTGAATTAAGATCCCATCTAGGACCTTACTCAAAGGTGAGGGAAAGAAGAAATTCATAAATTATTTAATTTAAAATAATTAAAAATCTGGATGTTT AAATATTTTTTGATGGTATATGTCATTAGTATGTTTATTCAATACTAGAAAGTGTTGTTAGCTGGCATTTACAATAGTACGACATAACCAAAGGTAGGGA CCAATCTTCAAAATTGAAGAGTGAAGAAGAACAATATGGGGTTGGGTGGTGAGCATTCAACCAATTGTTATTGAAGAAATAGTACATACTTGTATTTAGA AAGTTGAGCTCCTTTCCTGTACTAGATATAATAATTAGGTTTTTAGTGTATTTTTAAGGTTAAAATAATAATATGAAATAAATTAAAGGATAAAAACATT AAA
• Tissue: pods
• Gene name: LI_gene_149963;
• Additional information: details;

Expression of Ll_transcript_308906

FPKM

• PAB: 72.5
• PNAB: 24.9
• PS1: 105
• PS2: 10.8
• PS3: 21.2
• PW1: 246.2
• PW2: 87.7
• PW3: 24.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_308906

• Blastp: Allene oxide synthase 1, chloroplastic from Lycopersicon with 67.04% of identity
• Blastx: Allene oxide synthase 1, chloroplastic from Lycopersicon with 67.04% of identity
• Eggnog: Allene oxide synthase(ENOG410ZAGU)
• Kegg: Link to kegg annotations (606711)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458577.1)
• Pfam: Cytochrome P450 (PF00067.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;