Ll_transcript_309980

• Id Trinity: TRINITY_DN47162_c3_g1_i11
• Name Transcript: Ll_transcript_309980
• Sequence: AGCTCCGTCAATGGCGAAGAAGAAAGCGATGATAAACAACAACAACAACAACAACAACAGCAGCTAATTAGATTCCCTTCCCGTAACGCTTCCTCCAAAT ACGATTTCGTGAAGGTTAAGGTCTGGTTGGGTGATAATGCTGATCACTACTACGTTCTTTCCAGATTTCTCCTCAGTCGAATGCTCACCGTCACCAAGAT TCCAAACCATGTTGCTATTAAGATTGCCCTTGAACTCAAGAAGCTCCTCACTGACAATAGTCTTCTTGATGTCTCTCAGTCCGATTTGGAAGCCAATCTA TTTAAGCTTATGGAGCGGCGGGGATATGCAGAAGAATACATAAACCGTTATAAGATGATGACAAGATTTCACCACCAAAGAGTTCCATTAGTAATCCTTG TATGTGGAACTGCTTGTGTTGGGAAGTCTACTATTGCCACTCAGCTTGCACAGAGGCTAAATTTGCCAAATGTCTTGCAGACAGATATGGTTTATGAATT GCTGCGCACATCAACAGATGCACCATTGGTGTCAACTCCTATATGGGCTCGAGACTTCAGTTCATCAGAGGAGTTAATAACTGAATTTTGCAGAGAATGC AGGGTTGTTCGCAAAGGTTTGGCTGGTGATTTGAAAAAGGCAATGAAGGATGGAAAGCCAATTATAATTGAGGGAATACATTTGGATCCAAGCATTTATT TAGTGGATGATGAGCATAAATCACCTTCTGGTGTACATTCAGAAAATAAAGAGATAAATCCAGCATCGCTGGCATTGGATGATAATGCTACAGTTGAAAT GAAAAATACTAACGTGGGTAATGGTGATGAGAGTAATGGAGGTTCCAGTATTCTGAGCTCCAACGGGGGAAAATCTGCTCACCAGGTTGATGCAGTATCG AGTTCCATGGCATCAATGGGCATAACTGAAAGCATATCTGCTGGTAATAAAGGTTTGCTACAGTTTGATGCTGTTCAGTACCTTTCTAAGAGACAACCCA TAATATCCATCGAGTTTCAACTTAAAGTTTTGTAGCAAATTAATTTGTCATGCAGGTGCTTCCCTTGTAGAACTGGAGACAGACAAAACTACTATTAGTA AGAAATCAGGTCCCAAACCAATCATTGTGCCTATTGTTCTGAAGATGGCTGAATTTGATCATAAGGCATTACTTGAGGAATGGATCTTCAGCCGTACATT TAAGGATAAATGCCTAGACCAGGCTAATGATAAGCTTATAGCCAACTTGAAAACCATACAGGATTACCTGTGCTCATTCACATCACAGGGGTTGACTGTG GTCAATGTATCAGCAACAACATTTCCTCAAACGCTGGATTGGCTGCATAATCACCTTCTTCAGTGCATCGAGCAAGGTACTTCATCAGGGTCATGTGAAA ATGTTACACAAGAATCTGCAGCATAGTCCTCTTATAATGATTGCAATTATGTCAGGTATGGAATCCACAAGCATTAAGTTTTACTTTATGTTTTTGTCTT CTATAAGGGTATGTTTAGCTTGGAAGTAAAAGGAGAACTTTTAATCATTCAAGTATATTTGGTTGATAATTAAAAAACGGATGAAGATTTCTGCAGCATC GGTTAACCCATATATTGATCTCACCCTGTTGGAAATAGATCTTGGTTGCTATTGGTTTTTGCATGTATGATCATTTCCATCATAGAAGCTTTTGATTTTT TTTAGTCAAATGAATACTTACTTGAAAATGCATGGGACTTGATAAGTGTTAGACACTGGTATGCATGGGAGGGGTGTTTAAGACCCAAATTCCTTGTAAT TTTTTGTTATATCTTGTCAAATTTCTTTCTAGTTCCACGTTTCATGTTTAAATGCTGCATACATGATAAATTAACCATTTATGTCAGTGTATAAAACTCA TACACTGTCAGTGCATATATCTTTTATCCTTTCCTTTTTACTAAACGGTGTTGA
• Tissue: pods
• Gene name: LI_gene_150331;
• Additional information: details;

Expression of Ll_transcript_309980

FPKM

• PAB: 0.4
• PNAB: 1.3
• PS1: 0.8
• PS2: 0.8
• PS3: 1.3
• PW1: 0.9
• PW2: 0.7
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_309980

• Blastp: 2-phosphoglycerate kinase from Pyrococcus with 32.31% of identity
• Blastx: 2-phosphoglycerate kinase from Pyrococcus with 33.76% of identity
• Eggnog: 2-Phosphoglycerate kinase(COG2074)
• Kegg: Link to kegg annotations (PH0149)
• CantataDB: Link to cantataDB annotations (CNT0002564)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412846.1)
• Pfam: AAA domain (PF13238.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;