Ll_transcript_384675

Id TrinityTRINITY_DN47240_c1_g1_i11
Name TranscriptLl_transcript_384675
SequenceCAACCTCACAACACAACCTGTCTCCATGTACCACCTCTTTCTACACATTACTATATTCTTTCACAGCTTCTTTCCTTCCCCATTGATCAAGGGACGGTTT CATATACCCTTTTGCAAAATAAAAACAGTTACCTGAATTTCCATTCTTTAGATTAAGGTTGTGCTGTTTTTCTCTGTGGTCCATTTCTCCACTTGCAATG TCAAATGATAATAACCAAGGTCCTGGGACCTGTGAAAATAGAGAAGATATCTCAATTCAAAAGGACCAAATATCATCTGAAATAACTGAGGAATTGCCAA GTGAACAGCATGGAACAAGGCAAAACCTTAACTTGGACATATCCACAAGAAAGCTCGAGGAAGCTGAAGAACACCTTTTCAGAATAAACATACCTCCAAC TCCACCACCTCCCGGAACAGTATACTATTCCCCTTATCCAAGCTCTGGTTTCTCTCGAAGCCACGAAACCCCGGGTCCTTCCTCGTCAAAAAGTAGATCA ACTATTAAGAACTTTCTCACGAGACTAAGTTTTAAAATTCACAACAGCAATTCAGAGATTGAAAAGGCTTCCTTCCTAGCACTTCAAGGTTCATCCAAAG TGGCACCTAAAAAGCTTTTTATTTCAAGGACATTATCTCCTTCAAAGCTTGCCGCAGGTACAGCGAACACAGCATTATCCTTACCTGTAACCCCAATTGC TCATTCAAATCAAGACTCTACACATGGAGGGAACATAGCTTCTATAGCAATATCTGTTGAAAAGGGAATGAATTTACCAATTCATCGTTCCCATTCAGTT CCTGATTTTACCAGAGACGATAATGTCGGTTGCATGTTTGGTATGGTTTCAACCACACCAAGATTGGCTGAGAAAACTGTCACAAGGACGACTCCAACAT CTATACCTGATGATACTGTTGAAAATGAGGACGGCGGTGAAGATATTCCTGAAGAAGAAGCTGTTTGTAGAATTTGTATGATTGAATTGGGAGAAGGTAC TAATACTCTTAAATTGGAGTGCAGCTGCAAAGGTGAACTATCATTTGCGCACCGAGAATGCGCAGTTAAATGGTTTAGCATTAAAGGTAATAGAATTTGT GATGTGTGCAAGCAAGAAGTTCAGAATCTACCGGTCACTCTTTTACGAATTCAAACTGTTCGGGGGCACAGAGACCAGGAAGATGAGATTTCTCAACACA GATTTTGGCAGGATGGTTCCATTCTTATCATTGTCAACACACTGGCCTACTTTTGCTTTCTTGAGCAGCTTCTGGTTTCAAAAATGGGATCTAGTGTAGT TGTAATGCCACTCCCTTTTTCTTGTATACTAGGTCTTCTTGCAAGCGTGGCAGCTAGAACAATGGTGAGGAGAAAAGATGTTTGCGTTTATGCAACTGTT CAGTTTGCTCTGGTGGTTCTGGCTGGACAGATTTTCTATTCATTGATTCATATGCCAGCTGTTCTAGCTATCCTACTTGGTACAGTCACTGGCTTTGCAA TTGTAATGTGTGGAGCTTCTATACTTGCTGTGATTTTGAAGTGGAATCAACAGCATGATTCCCAGCAGGCGGTACTTCCCGATCAATCATCATCGGCAGC AGTTCATCAACCCCATATTGATTCTGATCACCCTGAGTAATTTAGGAGACTCTCCTGCAATTGTGAGCTGAAAGAATATTGTCCATCGTATTTACTTTAA GGATGGCATCATTAGGTGTTTGGTTGTACATAATGTATAGACAAGTTTGAGCACATTACATTATACCTCTCCTTTTTCAAGCAATGATACAGAGGTTGAG AAAATGAGGATCACATCTTTTGTCCAAATATGTGTACCACTCCATGTACCCTTTTATTCTTATGGGTCGAAAATGTAAATTTATATATTTAATTCATATC CCAAAAACAAAAGGTTGATTATTCTTTTTATTTTGATATGTATACATATATATTTAGTTGATTGCCCTATGAAAA BLAST
Tissuepods
Gene nameLI_gene_151015; 
Additional informationdetails; 

Expression of Ll_transcript_384675

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_384675

BlastpE3 ubiquitin-protein ligase MARCH7 from Rattus with 29.17% of identity
BlastxE3 ubiquitin-protein ligase MARCH7 from Rattus with 29.17% of identity
Eggnog(Membrane-Associated Ring finger (C3HC4))(COG5183)
KeggLink to kegg annotations (311059)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432271.1)
PfamRING-variant domain (PF12906.6)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;