Id Trinity | TRINITY_DN47370_c0_g1_i3 |
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Name Transcript | Ll_transcript_500051 |
Sequence | GTCAAAATTCCAAAGCTAATGGTTCTCTGTACGCGCGATTGAAACCAACGGAGATCATATCATAACCGTTGATCTATTCTCCATGTCATGGTTTTCTGAT ATTAACCGTTAGATGAAACTGATTTCATGATACCAAATGAGCCTTCCCGCATAGGATAATTTCCATGCAAGGATGTAGGGGACAATGAATTCCACTATTC CTTCATCAAAGGTTCATGTCCGAAAATGAAATGAATCAAAATTGTATCCGAGAGTGCTCAACTACACACAACTGATATAGTTTACTGAAGTAGTGAGAAT AGAAGTTCATTTGGAGCACCATGGATTTGCATTTGAAGAATTTGTTTGGAAGATTTCAGGAGCAGTTTGGGTCTGGACCTGGATTAGGTCCTGGATCTGG AACATGCCTGATGAAAGTTGATGGTATTGATCCTAATTTCATTAGATCTTTATACAAAGCTTCTGCGGCCTTATATCGAACTGAGCCGTGGAAAAGATTG CGTCCAGGGCATTATTTCGGTGTCCGGGTTGGGAAGGATTCAGGGTGGACTGACAAGAAGCAGCCTTTCCTTTGTGTCCAGTTCATTGGAGGGGGTGGAG GGGATGTTGGGTTCTATATGTTCAGATCGGAAAGTGATGCTAAGAAAATGACAGGGCCTAGAGAGACCATTCATGTTCCGAATGTTGAGCTTCTGAGGGT CACTTATGAAGTGGAGTCCTTGATGTTCCCTTCTAATCGCAAAATGATCAAGACTTTGTCACTGGAAGCGTCAGGTACTGATCGATTTCCTGTTATCGAT GTAACTCGCTGCATGCCTGGTGGTGATCTTCGATTCAGAAATCCGTCATTTGAAGAGCTCAGGTTTGTCTATGCATTCATGAAAGCTATTTCTATGGTGC ACCCCTTGCTTATGCAGTTAGACAAGGAAGGTGGTCCGAAATATTCAACAATGGCGTATTTTGAACCTTTCATTGAGACGGTTGATGTTCAGTGGCCTCC AGAAGTAACAAAGAGAGGTTATGATCTTGTCGCTGTTACTATCTCGCACCCACCAGGTCAGGTATATGAAGAAAAAGGTGGTATGAGTGCTGGCTCAACC CCAACCAAATATAGAGAGTCGCCGGGGGAGGGAAATTTCAATGAAACAAAAGTGTATTCACATGCTGGATTGAGACAGTGCGCAATGTGTGATAAAGAAG TGCATGGAGAACACTCACTTTGTTGTGGCCAGTGTAGATCAGTCATTTACTGCAACTCATTCTGCCAGAAGCAACACTGGAACGACACACATAAAAGCAT GTGTGGACTTTACAAGGCCATGATGGAAAGGGAAGAAGAGTTGGCTATAAAAATTTTCATGTTCCCATGTTCCGCCGACCAGCCTTGTAAGTGGCTTGAA TCCTTAAGCATCCACCAGAAAGGTATGTGGAGGAGAAAGTGCAGTTGCTATTCACACTGCGCTTTCGGTCTCCTCCCTGTGAAAGGTGGGCTGCAAGAAC TATGGGGCGGACTTAACGAGTTTGAATATCCTCACGACTTTCCTTTTAATAACCATTACGTCTCAAGCCCGTTTCACCTCTCTGGTTGGTCAGAGTACTA CAACCTTCGCTCGCTTTCACTGGCGAGTCCTGTTGCAGACATTCTCTCGCATCCGTTGACAGTGTATCACATACTAACTACTCTTAATATAAGTTCAAAG AATCTTGTACTGAAAGGGAAGGAGGTGATTGTTCACTACCTTGGACCTGAAGGTGAGTTGGATTGGATGCAAGCATTTGCCGAAGTAGGCCACTTGCTTA ATGGATTGGGCAATGTACAAATAGTGATGGTGGGACCGGAAGTTCCAACAAATTTGTCTGGTACAACTTCTGGAATAGGTAGCAGAGTTAGAGTGAACTT TGTGCGAGGTGTTTATCAGGTAGAAGCCTCCTACCTACCTACTCCGCATGCTGTCATAGCTCTAAACTCCGATTTAGAAAGGTATTCTAGTTGGGGTGGA GCTCTTGATTTAATCAAGTTAATGGCTGTGCCTGCATTCTTCACTGAGCAATCTGAAGTTTCATGTGTAAATGCTAAACAAGTCCTTCGTAATGCTGGAC TGCACATCACACAACCGGTGACTCCTAATCCTTTTCGATCGCCTGTGAAAAATCTCACCCCTTCTAGCAATCTTCCTTCATACAGCAATGGTTTTGTTTT TGGGGTAAATACCTGAATGCTGTCCTATAACTCCAAAAACATGTCTATCTACTGTCATTGATTCATAGGGTTGCAGCAATCTTCGAGTTTTCGCAGTTGT TAATTTGTTATACGGTCTGCTGAACATTACAGCAAAGTATGGAGATCCTTGTGAGTTTGTTCAATATATGAATATAGACTCTGCTTGGCATTGTCTCTTT TGAATGTTAGAATTATGACTCTTGTTTTTGTGCAAATTATTGTAATGTGCCAACATTTTCATAGGTTCTTTCATCACATTGAAGTTTATGAAATTTATGT TTCATATAATCTTGTGCACAAAACCTTAACCAAGTTTGTAAAAGTTGAAATCAAATATGAGATTGCTCAACACATAGCACCC BLAST |
Tissue | pods |
Gene name | LI_gene_152063; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_500051
Blastp | Zinc finger MYND domain-containing protein 15 from Mus with 28.53% of identity |
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Blastx | Zinc finger MYND domain-containing protein 15 from Mus with 28.53% of identity |
Eggnog | zinc finger, MYND-type containing 15(ENOG4111I8B) |
Kegg | Link to kegg annotations (574428) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419631.1) |
Pfam | MYND finger (PF01753.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |