Ll_transcript_501052

• Id Trinity: TRINITY_DN47385_c0_g1_i2
• Name Transcript: Ll_transcript_501052
• Sequence: TGGGAGGGTATTTTCTACATCTTTGGGTTCCCCAGCTATGCAGAAAATCAGCTTCAAAATCGACGCTTTATGAACAGTTTGAAATCTCATGCAGAGTTTC AAAGGGATAAGATGATGGGTATTTCCAAATTTTAATTTTTCTGAAACTATTACTTTGATTTTACATATTTTGAAATTGAAGTGAATCACTTGCTACAAAT TAGAAATACATAAGTTTTCTGTCTTTTTCATTCATTCGAAATGAAACTAAGCTTAAGCAGTGTATATACTCCTTATAGTTTCCCTATAATCCTTAAATCT TATGCATTTAGCAATCTATGTAAACCCTTTTGTTCTTCAGCACTATCATCATCTCCACCAATTTCATTGAAACCCCAAGTTCCCCTTTTTCTAAGGCCAC CAATTTACTCAACCAAGTTCTGTAACTTCAAAAAATGGCATGATTGGGCCAAAGGTATTGCTTCTTCAATTGGGTCAACTTTTGTTAACTCAGATAATGG CCCAGACTCAAGCATTTTGTGCAGGGAACTCAAGTGGTTAATGGAAGATGCTGTTGAAGACCACTCACTTTTTTCCAAGATGGATTTTGAGAATTATGAT GAGAGGGTGAAAATGAGGGTTGGGATAGAAGAGCTTTATGATCTTTGGAAGGAGAGGATAGAAAAGAGGAGACCTTTTCAGTATGTAGTTGGTTGTGAGC ATTGGAGGGATTTGGTGTTGAGTGTCCAAGAAGGGGTTTTGATTCCAAGACCCGAGACGGAACTTATTGTTGATTTTGTGTGTGATGTGGTATCGAAGAA TGAGGATTTGAAAAGAGGGGTTTGGGCCGATTTGGGGACCGGAAGCGGTGCCCTTGCTATAGGCATTGGTGGGGCTTTGGGAATAGGAGGGAGGGTTATT GCCACAGATATAAACCCCGTGTCAGTTGCGGTTGCAGCTTATAATGTGCAAAGGTACTGCTTGCAGGACAAAATTGAAGTAAGGGAAGGATCTTGGTTTG AACCATTGAAGGATATAGAAGGAAAGCTTGCAGGTCTTGTAAGTAACCCACCATATATACCAAGTAAGGAAATCTCTGGTCTACAAGCCGAAGTTGGTAG ACATGAACCTCGAGTTGCATTAGATGGAGGTATTGATGGCATGGATTATCTTTTCCATCTCTGTGATGGGGCTGCTTTATTCTTGAAACCTGGTGGATAT TTTGCCTTTGAGACAAATGGGGAGCAGCAATGCAGGGCTCTTGTTGATTACATGAAAAATAAGAGAAGTGAAAGCTTATGCAATTTTGAAATAGTTGCTG ATTTTGCTGGTATTCAAAGATTTGTAATTGGATTCCACCATTAAGCACATTGAGTTACAAAATACATGTTTATTTTATTGGTATTGAGGCAAAGACCAAG TGAAAACAAATCAAGATTCAAGGGTAACTCATTGTTTTCCACATTGGTCATGGTTTCTTTTCAGTTTTTTGGACCAACTGTTGTAGACATTGTTTGGAAG GCATGCTTTTTTGTTACAGATTTAGCCCACCGACCCGACAGTATAATTTTTACACCGTCAAAATACCATTCAGCATTGATTTGTATTAATTTTGTTTGAA AGTCAGTAGTAGTTAAATATAAAT
• Tissue: pods
• Gene name: LI_gene_152168;
• Additional information: details;

Expression of Ll_transcript_501052

FPKM

• PAB: 2.1
• PNAB: 6.7
• PS1: 2.2
• PS2: 2
• PS3: 3.2
• PW1: 2.9
• PW2: 3.5
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_501052

• Blastp: Release factor glutamine methyltransferase from Thermosynechococcus with 33.77% of identity
• Blastx: Release factor glutamine methyltransferase from Thermosynechococcus with 33.44% of identity
• Eggnog: Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif (By similarity)(COG2890)
• Kegg: Link to kegg annotations (tlr1836)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443714.1)
• Pfam: Methyltransferase small domain (PF05175.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;