Ll_transcript_476627

• Id Trinity: TRINITY_DN47436_c5_g1_i6
• Name Transcript: Ll_transcript_476627
• Sequence: TGTGAATCATTTTGTGATTAAAAAATATTTTTAAATTTGATGTGGCCCAAATGGGGTCTGATGCGGCTTAAATGCAGTTCCATGTGACTGCATGAATGCA TCCTTATGATTCAGTGTCACACTGCAATTACGGCAGTCACCGCAACTGCAAATATCGTGGCTGCATCACGTGATATGGTCCACAATTTGAATCACTACTT GAAATATAAAAAATTCTTAATCCTTGTGTTCTTTATAGTTGGAATTATTTAGTGTTCCCTGCATCAGTATGGAGCTAGATTCCTTTGCTTTAAGCTTAAT TAGGCTACAATAATTTCAACATGCTTGCTAGGTTTAAATCAAAGTGTTGTTTTTAACTTTTTATCTATAAATGACTGCAGTTTCTTGTATTTTAGGTAAT TGTGGCTGACGAGGATAACAGGAAATTGATCTTCTCTGAAAAGGAAGCTGCCTGGTCTAAATTCTCTGGACGGGTCAAGGTTGGAGACATTTTTGAAGCA AGAGTTGGCTCTGTTGAGGATTATGGTGCTTTTGTTCATTTGCGCTTCCCCGATGGTCTTTATCGCCTTACTGGACTAGTACACATCTCAGAAGTGTCAT GGGATCTAGTTCATGATGTAAGAGACATCTTAACAGAAGGTGATAAATTGAGGGTTAAAGTTATCAATGTTGATAGAGAAAAATCAAGGATTAAACTGTC AATTAAACAGTTAGAAGAAGATCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGATTCAGCATATTCTGATTCTTTGAGCGATGATGATAGC AGTGTTATTGAGCCTCTTCCAGGACTTGAGACAATCCTTGAAGAGCTACATAAGGAAGATGGTATATTTGATGCAAGAATCAGTCGTCAAGGGTTTGAAA AACGTGTTGTCTCACCAGACTTGCAGCTTTGGCTTTCCAATGCACCTCCTTCAAACCAAAGGTTTACTCTCCTTGCTAGAGCTGGAAGACAGGTGCAGGA GATCCACTTAACTACATCCCTTGATCAAGAAGGTATCAAAAGGGCATTACAAAGAGTATTGGAGCGTGTCCCCTGAATCTCACTCAGGAACAGTTCTTCC AGCTCCATAATATCTCAATGATTTTGTACAGTTATCACACATTTAAAGTTCAGATATGACCCTGCATATTCCATTACATCAAATCATCGTGATTTAACTC TAAAAAAAAGTCCTTATAAGAACACTCCATCAAATAACATTTGCTTGAATTCATTCATTCAAAACAAGTACTATTTTGAATAGATAATGAAGAATCAGCA ACACAGGAAACATAAAAACTTATTACATATTGTCCTGAAATGGGTGTTCCCTATCATGTCATATTCATAGATGATATTATTTTCCCTTTAGGATTCGTAA TTGTTCATTCAAGCAAGTGTCGTTTTCAGGAATTAAATCATTGATCTTTTGGTTTTTTTGGGGTTTTACATGATTAGATTAATATTTTGTTAGTATATAT ATATAGATGATATTATCATTGATTAACTTATTAAATAGTTCTTCAATTAATGCATCTTTCATTAGATGATGCACCATAGTTATTGAATGAATGAGGATCA TTGATTTGGATAAACTTTTAAATCAATGATTAGATTAGTATAGGTTATTCGATAGGCATGTTGAATGTTGTTTATATGGAATTAAGAAGTTTTAATATTC CTGTTTCTTTTTTTATAGCACCATTTTGGATAATTTTATACTAATTAAGAGTTGTAAAAATATGTTTTAAATTTGTAAATGATTGTACCTAGTTTACAAA ATTGTCATTATTTTTTTAAGTGTGATGCTTGAAAAAATAAACCTATTTCAATAATCTCTTTTCAGTGTTGTGATATGATTGAATAACAGTGTTCATTAAT CATGATGAATTGGGTCCAATATTAGTTTGATAGAAACTAGTACTTATTTTTCTTCCTTTTTGTAAAGTGCATCATGTGGCATATGAAAAAAGGTTTGTGG CCAAG
• Tissue: pods
• Gene name: LI_gene_152583;
• Additional information: -

Expression of Ll_transcript_476627

FPKM

• PAB: 0.3
• PNAB: 0.5
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.5
• PW2: 1.2
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_476627

• Blastp: -
• Blastx: 30S ribosomal protein S1 from Leuconostoc with 36.54% of identity
• Eggnog: thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (By similarity)(COG0539)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438287.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;