| Id Trinity | TRINITY_DN47461_c0_g8_i1 |
|---|---|
| Name Transcript | Ll_transcript_477328 |
| Sequence | GGAAAAAGTTATAGGGTAGGATGAAATTTTGTGAAAGTTGAAAGGAGGAAAATTTTGTTGTGATTGAATGACTTATGGATGAGTTGGTAGTAACATGTAT GTTTATAGTATAGGTAGTACAAGAACAGCAGCAGAAGGACAGTGATGAAATCACAGATCTTTTAACACCTCATTCTGACCAAACACTGCCATCATCAAAG GGCTCCCCTCCCTCCTATAGGACCAGAATGAAACCCTTTTCCCTATAATAATAGAGAGAGCCTTAAATTTTATTAACCTACTAGTGTTATCTCTCTTTCT TTCTTTTTCTCTGCCTTATTGTGTCTGTTTCTCTGGGTGTGTTGAGATATGGAAACTTTGTTGCAAATCTTATTAGAGGACACCTCTTCCAGTTGGGTGG TTCCCTAAGCCTTGTTTGGCCAAGTGGGTATTAAGTTATTAACCAACATAAGGCCCTTACCCAATTGTAGTTCCATCCAGTTTGGTTAGTGCATAAAAGA GCTTAATTAGTAGAAGGGCAAAAACTGGTGTGAAGAGAGTGTGTTTGTTTGTGTGAGTGATAAAATACTCAAATAGAGAGAAAGGGAAAGTGATGGGTTA GGCTGAAAACAGAGTAGGTATAACAGCATCAACAACAACAACATTGTTGGTCTAGTTCAGTTTTATCATTATATGAGTTCATGAGTTAGAATGCTTTTTT TTGTGTGGTGGTGGAACTTAGAAAATTGAATGGCAGGAACAACTTTTGGGAGAAGCAAGAACAAGTATCAGAATTGTGGCAGTGGCAGAAAGATCAAGAA GTAAAAGTGAGAAGAAACAAACTAGGTTAGAGTTCAAAAAATCAGTAACAACAAGGCAGTAAGAGAAAGCATTGATTAAAAGCTGGAAGAGGAAAATCAC AACAAGGGTCTGAGTCTGGATCCTCATAAGAATCATCCTCATCATCAAAACTCTCTCCAATTCCAATATCTCCAACAACAACAACAGTCCTATGTAGATT TTGACACAGACTTGCTATCCCAAATTCCAAAAAAACGATTTTTTCTTCTTCCTCCCTTGTCACCATCACCTTCTATAATCAAACATGCAAGAGGGATGAG GAATACTACAAGAACAAGAGTTGGAGAAATCGTTGAAGTAGAAGGCGGTCACATTGTACGGTCCACAGGGCGAAAAGACCGACACAGCAAAGTATGCACC GCCAAGGGACCAAGAGACAGGCGTGTGCGTCTCTCCGCCCACACCGCCATTCAATTCTACGACGTCCAGGACCGCCTCGGCTACGACCGCCCCAGCAAGG CGGTCGATTGGTTAATAACTAAGGCCAAGGCCGCCATCGACAAACTCGCCGAGCTCCCTGCCTGGAATCCAACCACCACAACCAATTACCAACAAATAAA TGAAATCCTCCACCGCCACCCACCCGCGGTGGAGGATGTAATAATTGGTTGTGGTGGTGGAAGAATGTCAGAAGAGTTTCAACATCAGCAGCAGCAGGAG GAGGAGGATTTTGCTGAAGAGAATAATAACAGTAACAAATATAACAGTGTTGGTTCTGGTTTTCTTCCACTGTCTATGGATACTGATATTGTGGATACGA TTAAGTCTTTTTTTCCTACGGTTGCTGCTGCGGAAACGACGGCGTCGTTTCACACTATTTCAAAACCGACAAGCGCTGCTGCAAATCACAACCACCAGGA AGATCTACGGCTCTCGTTACAATCATTTCAAGACCCCATTCTGCTCCACCACCACCAACAACAACAACAGATTCAGCAAATGTTGTTCACCGGAACTGAC ACGCTTGGGTTTGACGGTGGTGGTTCTTCTGGGTGGTTGGAGCAACACCATGGTGAGGAACAGGAACTGGAACAAGAACATGACCATGGTCGGTTTCATA GAATGGTGGCTTGGAATGCTGCTGTTGCAGATGCTGGTAACAACGGCCACGGCGGTGGATTTATCTTTAACTCGTCGCCGCCGTCCAGAGTGGCGCCGGC GGTGACGTTTGGCCATCAAGGCCAGTATTTTTCTCAGAGGGGACCCCTTCAGTCCAGTAACACTCCTTCGATTCGTGCTTGGATAGACCCGAATTCCTTT GCTGCGGCGGCAACTGTCGCCGCCGCCTCCCACCCCCACTATCACTACCTTTCGCCGGCAATGCATCAGGCTTCTGTCTATGGTGGCATTGGGTTTGCCT CACCCTCCAGTGGCTTCTCGGGCTTCCACATGCCAGCACGAATTCAGGGTGAAGAGGAACACGACGGCGTTTCAGACAAGCCGTCCTCTGTATCCTCTGA TTCTCATCATTGATGGAAACACAAAAACTAATCTTTCCTTCTCCTTCAGGGTTTCTTGAAGATTATGATGCAATGGATTTTCAGCTACAATGGGAATTCA TTCCTTCCAGATCAACGTGGATGAGGAGTTGAGTTTGGGTTTCAGATGCTTCCACTTCAATGGCCTAATATGCCATGGGAATGAAGAAAATCTGGGTTAA TTTTCAGGCTTTCCAATCCCATGGTTTGTTCTGCTTTTTAATCTTATGTTCTAGCTATGTTTCAAGCATTGACTAGGACTAGGAGTACTATGTTATGTTA TATTGTTATGTTTCAGCAATGTTGGATTTGTTATCTGTTCCTATGTTACAGTTTGTAGTGGATGTATTTTTGTACTTCCATTTCTGGGTGGCACAGGCAA TGGTCTGGAAAAACATGCAACACAAAAAATAACAGTTTGTTTAAGTTATTCTATATTTTTCCAACTTAGTACAGACCCAGATGCTGAATGAGACTTTCTT TCCATGAGAAAACGGGGCAAAACCAAATAAAAGCCAACATGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_152821; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_477328
| Blastp | Transcription factor TCP3 from Arabidopsis with 48.76% of identity |
|---|---|
| Blastx | Transcription factor TCP3 from Arabidopsis with 47.69% of identity |
| Eggnog | Transcription factor(ENOG410YG88) |
| Kegg | Link to kegg annotations (AT1G53230) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449183.1) |
| Pfam | TCP family transcription factor (PF03634.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |