| Id Trinity | TRINITY_DN47485_c0_g8_i2 |
|---|---|
| Name Transcript | Ll_transcript_475897 |
| Sequence | CTTGCTTCATGTTTTTTCTTTTTTTCTTCTTGATGGGTCTTTGAATTTGAATTAAAAAATGGATCTTTCAAGTGTTTTTTGTTTGTGTTATGTTTTCTTG TACTTGGTTGCTAAGAAAGTGTCTGAAAATGCTGTCTTTTGATTCATGGTTATTGTCCCGAGAATGCTAATGTGTATGGGAATTATTAGAACCATGCAAA ATGAATATGATTTCTCTTTCACCCTGAAAACAACCAAGGGCAGGTTGTTTTTGCTATTTGTTTAAAGTTGCAACTATTTTCTGTTTCTTATGTTGTTGCC GTCGTTTGTGCTTATTTTTAGAACTTTTGTTACTGATAAAATATAAAGATTTAACATTTATAATTTAAACAAATGGTTGTTGCAAACCTCATGGTAATTC ATGATTTTGTTACTATGTCAATCCTTAGTTGCCTTATCAGTTATTAACATCAGCAATATGGGGATAATCGGTGTCTTCTATTTCCTTTTTCTGATTTTTT GTTATGTATTTTTATGTTTTAGTAAATAGGTGTCGTTTTTTGTAACGAAGAAAATAGAAATCTTTTAACGGAAGTTTTCTATGGTTTAAATATATGAGAT ATGATATGCTGTATGGTACAATAGCAACTTATTCTCTAAGCTTTGTTTTTTTATTCATATTCTGTGAAGGTTTCAAAGGGAAGATAGAGTCATGTTCACT GCTTCCAATGATTTGCATTACAGAATTTCTGTTTTGCTTGAGTTCTCAGCCGCAAATGATGTGAAGGGTTTCAAAAATGCAATTGAAGAAGAGGGTCATG ATGTTGATGAGGTGGGATTGTGGTATGGAAGGAGGGTTGGTTCAAAGGACTTTGGTTATGAAGAGAGGACCCCACTTATGGTTGCTGCTATGTTTGGAAG CAAGGATGTGTTATCTTATATTCTTGGAACTGGTGGTGTTGATGTTAACCGGGCTTGTGGGTCAGATGGGGCCGCTGCCCTTCATTGTGCTGTTTCTGGG GGTTCTGCCAATTCGCCGGAAATCATCAAGCTTTTGGTTGATGCATCGGCTGATGTTAATGCTGTTGATGCCAATGGGAACCGTCCCTCTGACTTGACTG ACTTTGTGTTCCCTAGTATATTCAATCCTAGGAGGAGGATACTGGAAGCCATACTAGAAGGTAGAGATGGTGGTTTTGATGAGGCTTGCCTTACATTTGA TAAAGCAGATGGCGAAATGGTGAGGATGCAACAGCATTATATCGATGCACATCGTGTTCCAAAGGAAGGGACTGAGAAGAAAGTTTATTCTGTTGATGTC TCTCTTCCAGACATAAAGGATGGGATATATAGTACTGATGAGTTTAGAATGTATACATTCAAAGTGAAGCCATGTTCAAGGGCTTATTCTCATGATTGGA CTGAGTGTCCTTTTGTTCATCCAGGTGAAAATGCAAGGCGACGAGATCCTTTGAAATATAATTATAGCTGTGTCCCTTGCCCTGAGTTCAAGAAGGGATT GTGCAGCAAAGGAGATGCTTGTGATTATGCACATGGTATCTTTGAGTGCTGGCTTCACCCTGCGCAGTATCGAACTCGGCTTTGCAAAGATGAGGCTGGA TGCACTAGAAGAGTTTGCTTCTTTGCTCACAAGCTGGAGGAGCTTCGCCCGTTGTATGCTTCTACTGGTTCTGCAATGCCTTCTCCCAAATCATATTCGG CTACTGCTTCTTCATTAGAGATTGGTTCATTAAGCCCTTTCACACCAAGCTCTCCACCCGCCTCAGTACCACCTTTGTCTCCATCTGGATCAGCTTCTCC TCTGGGCAGAGCAGCCATGTGGCAGACCTCTCAGTTTCATGTAGCAGTCCCTACGCTTCACCTCGCTGGAAGCAGATTGAAAACTGCATCAAATGCTAGA GATGTTGGTTTAGGCATTGAATTGCCTGGACCAGAAAATCGTCAACTTATGCAGAATATGCTTTATTCGGATGAGATGGCTGAGCTTTCATCCCCTTCCA AATGGAAAAATACCAAGCTAAATAGTCCATCTTTTCATGACTCATTTGATGGTGATGCTGGGGAGTTAAATAGGAATCAGCAACTGAGAGGCTATTCTTC AAATGTGATTGGATCACCATTTTCTTTGAATTCAAGAAATGCTGCATTTTCAAAGCGGAGCCAGAGCTTTATGGAGCGAAGTGTGGTGAGCCATAATTCT GAGCCTTCCATCTTCTCTGGATGGGGCTCCCCTGATGGCAAATTAGACTGGGGCATCCGCGGAGAAGAGCTGAATAAACTGCGAAAATCTGCTTCTTTTG GATTTGGAGGAACCAGTAGTCCTTTATTAATGGCTGCAACCACATCACCATTGAATGTTGATGAACCAGATGTATCTTGGGTTCATTCACTTGTGAAGGA TGCTCCACCAATGGAAACTGGCCAGTATAGCATCGAAGAGGAGCTACATTCACCGCAACGATATCTTAACAATGGAACAGATGTGGTTCCAGCTTGGCTG GAGCAATTGTACATGGAGCAGGAACAGATGGTGGCTTGAATGCAGCATTTTCTCTGGCATTGGATATATTTCATGAAACTCTAAAAAAGTATATTTAAGT GATGATTTTTTTATAGAAACTCATTATATATAGGTAACAATTTGTAGAATTTATGGTAAAATACCTGCCAAGGCAAACCATACTGAAGATGAACTGCACC TTTAACTATTTGTACTAGGGTAATTGATTCAATTTTTTTCCTTATCTTTTCTTTTATTGGTTATTTTCTATTGATCTGAGTTTCCATTAAAAAGAGTATT AGAAATGTAGTGCGGTTGGTAAAATGTTTGGCCACCCCTACCGTATGGAGATCTTCCGTCCCCAAATATGTCCCCAACCATGTACCAAGCCAATCAGAAT AAAGAAAAAATAAATAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_153043; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_475897
| Blastp | Zinc finger CCCH domain-containing protein 66 from Arabidopsis with 48.78% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 66 from Arabidopsis with 47.93% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410XR0Z) |
| Kegg | Link to kegg annotations (AT5G58620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418018.1) |
| Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |