| Id Trinity | TRINITY_DN47512_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_526648 |
| Sequence | AAAGAACTTTAGGTTTTCTACTGAATTTTTTTGATGCTATTCATTATTTGTTATTAATCGAAAGAAATAAGATCTGATACTTGATATTTGTTCATTTTTA TGGTGTATATGTTCCTGTCTATGTTTGTTTTTGTTATATGATTCACAATTACACTGCAAACTTACAATATTTTCTCCTTAATTTGCTTTCTTCGAAGGTC TATGGCAATAATTTTGATTACTTTATCATTTTTTGTGACTATTTTTTTGTAGTGAAGTGTTGCTTCTAGTCTAGAGAAGCAATGAGATTGGAGAAATGCT GGTTCTGTTCTTCAACGATATACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCTAAGGTAAAATTAAAAACTACTTCATTATTCCCTTTAAAATT TGTCATAGTGTTCTAGATGTTGAACAATAACTGAAGGTAGGTCGAGTTTTCTATAGACCGGAAAATATTTCGTGCGAACTAGTTCTACTAGGACTTATTT TATAATATTTAAAGTGTAATTAGCAACAATTGAGGTTATATGTATAGTCACCATAATATAATAGTGTGAGTTTTTATGTATGTAAGCTTAAATTAGTTTA GGCAAACCAATTATCGTAATAGAAGCTTATCTGAGCCAAATGAAGTAATGAGATCTCCATGGAATGACAAGTTATCAGCTAAAAGGAGTTACCAATATGT TGTTTAATCCTTGTTGCTCTGGTGTCATGTATGTTACATTCATTGTGGAAAACAGGCTTAGCTGCTAGCTACTTACTGAAGCTACGGTGTAACTTTAATC GTGAAGGACAAGTCATTTGCATTGTACTTGGAGATTCTCATGTTTTTGCTTATTCTCCGATGATGTATAGATGGGTTCTGTAGTTGTGTCTCCTGCTTGA TTTGATTGTTGACATTAGATATATCAAGTTCACTGCTTATTATTTCATTTCTGTAACTGTCTGGTAGGATAAAGTTTATATATTTTACCTTTTAAAACTC ACTTAATCTCAAGAATGGTATGTGGCTATGTATGGTCATAGGCTCATAGCATCACTTCACATGGCATATGTGGTTTGGGTTTCTGACAACTGTTGTTGCA GATTTTTCGGTTTTGTAGATCCAAGTGCCACAAGAACTTTAAAATGAAGAGAAACCCTCGGAAAGTTAAATGGACTAAGGCATACAGGCGGGTGCATGGA AAGGATATGACACAGGATTCAACCTTTGAATTTGAGAGAAAGCGAAACAGGCCTGAGAGATATGACAGGAATCTTGCTGAGAATGTTCTCAAGGCCATTC CTAAGATTGATAAGATCAGAGTCGGCAGGGAGGAGAGGCACCATAAGAATAGGATGAAAGGCAAGAAGCAAAAGCTGCATATGGAGGCGGCTCGGGAGTT GGAGCAGAGCATCAGTTTGGTCAAAGCTCCTTCTGTTTTTCAAAAGGATCAGTCTCTCACTTTACCGAAGATTGTGGTCAGTGTTTCCCAGCAACAATCA GAAAGCCGCATGGAAGAGTGATAATGGCACACTCTTGTTTGTTTTTGTTTTATCAGTTTGGAGTTTGTGGCAGCCATTGGTCTAGTTAGATAGCTTGTAT TGTAAGGCTCCCAATTAAGTTTATTTGTTGTCAGTCTGTAATATTAGTTATGTGATTTTGAAACAAGTTATGGCCTTCAAGAATGTTAGTGAACTATGAG ATAGTGAACTATGTCAGACAATGCAAATCAGAAAGACTTTCTCAGACTTGTATGATCATGTCTCTGGCAGTGATGTTGTCTTTAGATTTAATTAAATATT TTTTATTGAACAATTATAGAATATTATACTTGTATGATCATATCATAGGTTTCTTTATTCTCTAAGTAGTGTATTCATATGAAAAACTTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_153280; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_526648
| Blastp | Probable ribosome biogenesis protein RLP24 from Arabidopsis with 57.98% of identity |
|---|---|
| Blastx | Probable ribosome biogenesis protein RLP24 from Arabidopsis with 66.98% of identity |
| Eggnog | Ribosomal protein(COG2075) |
| Kegg | Link to kegg annotations (AT2G44860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451223.1) |
| Pfam | Ribosomal protein L24e (PF01246.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |